Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3355 ATGGAGACAAGAGTGACTAGTACTGGCTCAGGTTCAGGCACCACAATAAAGAAGAAAAGTGGTGGAAATGGACAGGTTCTAGACGGTTCCAATATTATGGAGTTGGTTGGGAACGAGCAAGTTTTCAGCAACTTCGTGGACCATAAGTTCCAGGAGTTGGATAAGGACAGAGACGGTAGGCTGTCTGTGAACGAGCTTCAGCCTGCTGTTGCTGATATTGGTGCTGCCCTTGGTTTGCCTGCTCAAGGCACTAATCCTGATTCTGATCACATCTATTCCGAGGTGTTGAATGAATTCACACATGGCAAGCAAGAAAAAGTGAGCAAGACTGAGTTCAAAGAGGTTCTCTCAGACATTCTACTAGGAATGGCTGCTGGACTAAAGCGAGACCCAATTGTGATACTTCGAATTGATGGGGAAGATCTCCTTGAGTTTGTTAATGGTCAAAGTTTTGAAGCAGAAATGGCATCCATATTCTCTCAGATTGAATCCCCTGACAAATCACTTCGTGGCCACATAATTGATGCTCTTGCCAAACTCACTGTTGATCAAGGAATTCCTCCTACATCAGATTCTTGGGTGCTTGACAACATTGTGGAACCAACACTATCTCGAGCTGGCTGTGATTTGGATAAGCCTGTTTCTGATCAAGAGACATTTTTGGAGGAATTCAAGAAAGTGGCATTGTGTGTAGCTGATCGCCTTAAGGAGCAACCTGTCATTGTCGCCCATAGTGAAAACACCTTTGATGGAAGTGGCATTAAGAGACTATTATCCAACAAGTTTGAATTTGACAAGACTTTGAACTCAGCTGTAGAGGCTTTGCCTAAAGATCGAAATGGAAAGATTTCAAAGGAGTATCTACGGCTGGCACTAGACAGTGTGTCTCCATCTGCAGGTTTACCACCACTTGGTGCAATTGAAGAGATGGATAAGGTTATTGGGGAAGTCTTCAACATGATAAATGCAGATGATACAAAGACTGTTAAAGAAGATGAATTCAAGAAACTTTTGACTGAAATACTGGGGAGCATTATGTTGCAGTTGGAGGGCAATCCCATATCAGTTTCATCAAATTCAGTGGTGCATGAGCCTATGGGATCATCTTCTACACTTCTGAAGCCACCTTCTAATGAAACAGCTTAA 1146 0.4293 METRVTSTGSGSGTTIKKKSGGNGQVLDGSNIMELVGNEQVFSNFVDHKFQELDKDRDGRLSVNELQPAVADIGAALGLPAQGTNPDSDHIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGQSFEAEMASIFSQIESPDKSLRGHIIDALAKLTVDQGIPPTSDSWVLDNIVEPTLSRAGCDLDKPVSDQETFLEEFKKVALCVADRLKEQPVIVAHSENTFDGSGIKRLLSNKFEFDKTLNSAVEALPKDRNGKISKEYLRLALDSVSPSAGLPPLGAIEEMDKVIGEVFNMINADDTKTVKEDEFKKLLTEILGSIMLQLEGNPISVSSNSVVHEPMGSSSTLLKPPSNETA* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3355 381 Pfam EF-hand domain pair 49 115 IPR002048 GO:0005509
Dod03g3355 381 Gene3D - 203 346 - -
Dod03g3355 381 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 11 379 - -
Dod03g3355 381 ProSitePatterns EF-hand calcium-binding domain. 54 66 IPR018247 -
Dod03g3355 381 ProSiteProfiles EF-hand calcium-binding domain profile. 41 76 IPR002048 GO:0005509
Dod03g3355 381 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 11 379 - -
Dod03g3355 381 SMART efh_1 313 341 IPR002048 GO:0005509
Dod03g3355 381 SMART efh_1 267 295 IPR002048 GO:0005509
Dod03g3355 381 SMART efh_1 45 73 IPR002048 GO:0005509
Dod03g3355 381 SUPERFAMILY EF-hand 49 352 IPR011992 -
Dod03g3355 381 MobiDBLite consensus disorder prediction 1 23 - -
Dod03g3355 381 MobiDBLite consensus disorder prediction 360 381 - -
Dod03g3355 381 ProSiteProfiles EF-hand calcium-binding domain profile. 263 298 IPR002048 GO:0005509
Dod03g3355 381 Gene3D - 24 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3355 Dod-Chr3 66183494 66188683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3355 25 380 EF-hand Containing Proteins AT4G38810 68.802 1.16e-174 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3355 - - gmx:100820516 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3355 03 66183494 66188683 Dod03g3355 03 66183494 66188683 ECH