Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3351 ATGGGAGACGTAGGTATTCTGAGAGGTGTCACAAAGGAGGCCAACCCGGGGAAGGGTATAATATTGGCTCTTGGCAAGGCATTCCCACACCAACTGGTCATGCAAGAATATTTAGTTGATGGATATTTCAGGGACACTAATTGTGACAATCTTGAGCTCAAGCAAAAGCTCAGTAGACTTTGCAAGACAACCACAGTGAAAACAAGGTACGTGGTAATGTCAGAGGAGATACTTGAAAAGTACCCAGAACTTGCAGTTGAAGGCCTCCCAACTGTAAAGCAAAGGCTAGAGATATGTAACAAGGCAGTGACACAAATGGCCATTGAAGCCTCCCAGGCTTGCATCAAGAACTGGGGCAGATCTTTGTCAGACATAACACACTTGGTTTATGTCTCATCCAGTGAAGCTAGGCTACCTGGTGGTGACCTTTACCTAGCACGAGGACTAGGACTCAGCCCTTCCACTCAACGAGTCATGCTCTATTTTGTAGGGTGCTCTGGGGGTGTGGCTGGCCTACGTGTTGCGAAAGACATAGCTGAGAACAACCCTGGTAGTAGAGTGCTTCTTGCTACTTCCGAGACTACAATTATTGGGTTCAAGCCACCAAGTGCAGATAGACCATATGACCTTGTAGGGGTGGCACTCTTTGGGGATGGTGCTGGGGCCATTATAGTAGGCTCAGACCCTATAGTGGGAACTGAGAGGCCTCTCTTTGAGCTTCACACTGCAGTTCAGGAGTTTTTGCCAGACACTGAGAAGAAGATTGATGGGAGGTTGACTGAGGAGGGGATAAGCTTCAAGTTGGCAAGGGAACTTCCTCAGATAATTGAGGATAATATTGAAGGATTTTGTGACAAGTTAATGGGTTCTGTTGGGTTCCAGAACAAGGATTACAACAAGCTGTTTTGGGCTGTGCATCCTGGTGGCCCTGCAATCTTGAACCGTATGGAGAAGAGGCTTGATTTGTTGCCAGAGAAATTGAATGCAAGTAGAAGGGCTTTGATGGATTATGGTAATGCTAGCAGTAATACCATTGTCTATGTTCTGGAGTACATGATAGAAGAGGCCAAGAAGATTAGAAAGGATGGTAGAGACGACCCTGAATGGGGCTTGATGCTTGCTTTTGGACCTGGGATTACTTTTGAGGGTATTCTAGCCAGGAACCTGTGTGATTGA 1176 0.4643 MGDVGILRGVTKEANPGKGIILALGKAFPHQLVMQEYLVDGYFRDTNCDNLELKQKLSRLCKTTTVKTRYVVMSEEILEKYPELAVEGLPTVKQRLEICNKAVTQMAIEASQACIKNWGRSLSDITHLVYVSSSEARLPGGDLYLARGLGLSPSTQRVMLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAIIVGSDPIVGTERPLFELHTAVQEFLPDTEKKIDGRLTEEGISFKLARELPQIIEDNIEGFCDKLMGSVGFQNKDYNKLFWAVHPGGPAILNRMEKRLDLLPEKLNASRRALMDYGNASSNTIVYVLEYMIEEAKKIRKDGRDDPEWGLMLAFGPGITFEGILARNLCD* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3351 391 Pfam Chalcone and stilbene synthases, N-terminal domain 12 229 IPR001099 -
Dod03g3351 391 Pfam Chalcone and stilbene synthases, C-terminal domain 239 389 IPR012328 -
Dod03g3351 391 Gene3D - 237 388 IPR016039 GO:0016746
Dod03g3351 391 PIRSF PKS_III 8 390 IPR011141 GO:0009058|GO:0016747
Dod03g3351 391 PANTHER TYPE III POLYKETIDE SYNTHASE B 13 389 - -
Dod03g3351 391 SUPERFAMILY Thiolase-like 236 387 IPR016039 GO:0016746
Dod03g3351 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 389 IPR011141 GO:0009058|GO:0016747
Dod03g3351 391 SUPERFAMILY Thiolase-like 18 233 IPR016039 GO:0016746
Dod03g3351 391 Gene3D - 7 236 IPR016039 GO:0016746
Dod03g3351 391 CDD CHS_like 21 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3351 Dod-Chr3 66165564 66168815 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3351 87 376 Miscellaneous Gene Families AT4G34250 26.791 5.25e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3351 - - vun:114168705 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3351 03 66165564 66168815 Dod03g3351 03 66165564 66168815 ECH