Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3332 ATGCAGCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGTCAGGGAACAGCAACAGGTTGTTACAAGTGCGGCAGGCCAGGCCACTGGTCCCGCGACTGCCCTTTCTCCGCACCAAATCCAAACCCTATTTCCTCCACCGATCCCAGTCCTTCTTCTTCTTTCAAGCCTTCCGCAGCCGCCGGATCATCCGCCGCTTCCAAAACCGCCGAGAAGCCCAAGAAGCTCCCGAGGGCGAGGCCCAAGCTCACACCGGAGCTCCTCCTCTCCGACGACGGCCTCGGTTACGTCCTCCGCTACTTCCCTCGCGAGTTCAAATACCGTGGTCGCGGCCACGAGGTTCGTGATTTGGGGAATCTGCTTCACTTATACTCCGAATGGCACTCTCGCTTGCTCCCTTATTACTCTTTCAATGAGTTTATTCACAAAGTAGAGAAAGTTGCTGCCACTAAGCGTGTCAAGACATGCCTTAGAGAATTGAGAGAAAGAGTTGCAAGAGGTGGAGATCCAACAAAACTGCGTGAACCACCAGTTGTTCATGACGTTCCAGATAATGAGCAAGAAGACGGTGAAGCAAGCCATCAAGAGAGAGATTTGTTTTCAGAACCTCAAAGTGTTAATGACATTCAAGAAGACATGCTCAATGATATATATGATAAATCTACAGAAGAACCTTCTCAGTCCAAGCACAATGTGACTGGTGCCAGCACGGTTTCCAAAAGTAGCGCAACTGAAGAGGCAACAAATGAAGTCCCAAATAAGGGAGTCAGCATGCCCGGCAAAGCTGGGATAACAGAAGAGCAGAGAGCTCGTATGGAAGCAAATAGGCTGAAGGCACTAGAAAGGCGTGCTGCTCGAGCTGCCCTATCACAGGCCTCCTAA 900 0.5178 MQQGQGQGQGQGQGQGQGQGQGTATGCYKCGRPGHWSRDCPFSAPNPNPISSTDPSPSSSFKPSAAAGSSAASKTAEKPKKLPRARPKLTPELLLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLHLYSEWHSRLLPYYSFNEFIHKVEKVAATKRVKTCLRELRERVARGGDPTKLREPPVVHDVPDNEQEDGEASHQERDLFSEPQSVNDIQEDMLNDIYDKSTEEPSQSKHNVTGASTVSKSSATEEATNEVPNKGVSMPGKAGITEEQRARMEANRLKALERRAARAALSQAS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3332 299 MobiDBLite consensus disorder prediction 173 214 - -
Dod03g3332 299 Pfam Replication Fork Protection Component Swi3 88 169 IPR012923 GO:0005634|GO:0006974|GO:0048478
Dod03g3332 299 PANTHER TIMELESS-INTERACTING PROTEIN 23 295 - -
Dod03g3332 299 SUPERFAMILY Retrovirus zinc finger-like domains 8 44 IPR036875 GO:0003676|GO:0008270
Dod03g3332 299 MobiDBLite consensus disorder prediction 1 89 - -
Dod03g3332 299 ProSiteProfiles Zinc finger CCHC-type profile. 27 41 IPR001878 GO:0003676|GO:0008270
Dod03g3332 299 MobiDBLite consensus disorder prediction 227 283 - -
Dod03g3332 299 MobiDBLite consensus disorder prediction 1 24 - -
Dod03g3332 299 Pfam Zinc knuckle 26 41 IPR001878 GO:0003676|GO:0008270
Dod03g3332 299 MobiDBLite consensus disorder prediction 44 71 - -
Dod03g3332 299 Gene3D - 14 59 - -
Dod03g3332 299 PANTHER TIMELESS INTERACTING-RELATED 23 295 IPR040038 GO:0000076
Dod03g3332 299 MobiDBLite consensus disorder prediction 233 257 - -
Dod03g3332 299 SMART c2hcfinal6 26 42 IPR001878 GO:0003676|GO:0008270
Dod03g3332 299 MobiDBLite consensus disorder prediction 173 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3332 Dod-Chr3 65975472 65978611 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3332 K10904 - gmx:100808422 370.163