Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3316 ATGGATGAAGAAGAACAAGTCTCTCTATTTGATGAGAAAATGATAAGAGCTCAAAGAGCTGCCAGGACTGAAAACTGGAGAGAGTTCAAGAAAATCTTTGAGGAAGACAAGGATCGTTTGCTTGACCCCTTTGACTTGTTTGGAAACACTGCCATACACATTGCAACCCGCTCTGACAGTGCACAGCTCTTGCAGGAGTTGCTGGAAATGCTACCTGAGCAGGACAGATGGTATGCATTGAGGAAGGGGAATTGCGTGAACAACACCCTTCTTCATGAGATCATCTTCTGCACTACAGTGGACATGGCAGATGTTGTGTTCAAGTTTGAGAAGGATTTGCAGTCAGAAGAGAGGCAAGGGCCACCATTATTAGACATAAAAAATGATTCAGGTGAATCCCCTTTGTTCAGGGCTGCTAAGCTTGGCAAGCTAAAGATGCTCAAGTATATGGCCAAGCATGTGGTTGGTGACGTTAGAAGGCATTTTGTAAGATTTGACAAATGTTCCATCCTTCACGCTTGCATTCTTGGCCAATTTTTTGATGTTGCTATTTGGTTTTTGAGATTGGATGAAAAACTAGCTCAACACAAGGATATGGATGGATTGACATGTCTTCAACTTCTAGCGAATATGCCGCTGGTTTTTCGGAGCCAAGCCCCTTCAATGGGAACAATGAAGAACCTCGACAAGGCAAAGCTACCAAGTAGAGTTATTTCAAGGATCAACTATGCTGTTTGGAGAATCTTAGCTAAAGAGTTTGATGGGATTGGACGTATCTGGCAGCAAAAGAAACAGCACAAGTTAGCAGAGCATCTGGCTGAGTTGTTAGTGAAAAAGGACTTTTCATGGCAGATTTCATTTCATGAAAATTTTCAACCATTGATTGTATTGCCAGTTCTTTCCTCCAAATTAGACAGGATCAAACAAATTCAGCTGATGAAGGAGAAGCGGCAGATTGTCGAAATATCTCATTCGAAAAGTGACAAACCTTCACTAATGGCAGCCACTGCTGGAACACCCCCTTCTGAAAGTTACACACCTCTTCTCATGGCAGCTGGCTCAGGAATTGTAGAAATCGTTGAAAAAATCATTGACATGAATCCTGAGGCTATTAGTCACGTTAGCCAGGATGAGCACAATGTTCTGCACATGGCTGTGAAGCACCGTAACCTAAAAATCTTTGATATGATAAGGAGAAATACAGCATTTAAATCATTGACATATAGGATAACTGCAGAAGGTCGTACTCTCTTGCACCAAGTTGCCAGAATGGAGTTTTACAAAGAGCAACGCCTACCTGGTGTCGCATTCCAACTGCAAGATGAGTTGCGTTGGTATGAACCCCTCACCATCGCAATACTCGGTCTCTGCTTCTAG 1377 0.427 MDEEEQVSLFDEKMIRAQRAARTENWREFKKIFEEDKDRLLDPFDLFGNTAIHIATRSDSAQLLQELLEMLPEQDRWYALRKGNCVNNTLLHEIIFCTTVDMADVVFKFEKDLQSEERQGPPLLDIKNDSGESPLFRAAKLGKLKMLKYMAKHVVGDVRRHFVRFDKCSILHACILGQFFDVAIWFLRLDEKLAQHKDMDGLTCLQLLANMPLVFRSQAPSMGTMKNLDKAKLPSRVISRINYAVWRILAKEFDGIGRIWQQKKQHKLAEHLAELLVKKDFSWQISFHENFQPLIVLPVLSSKLDRIKQIQLMKEKRQIVEISHSKSDKPSLMAATAGTPPSESYTPLLMAAGSGIVEIVEKIIDMNPEAISHVSQDEHNVLHMAVKHRNLKIFDMIRRNTAFKSLTYRITAEGRTLLHQVARMEFYKEQRLPGVAFQLQDELRWYEPLTIAILGLCF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3316 458 Gene3D - 11 251 IPR036770 -
Dod03g3316 458 Gene3D - 305 441 IPR036770 -
Dod03g3316 458 SMART ANK_2a 377 408 IPR002110 GO:0005515
Dod03g3316 458 SMART ANK_2a 47 76 IPR002110 GO:0005515
Dod03g3316 458 SMART ANK_2a 343 373 IPR002110 GO:0005515
Dod03g3316 458 SMART ANK_2a 166 195 IPR002110 GO:0005515
Dod03g3316 458 SMART ANK_2a 130 160 IPR002110 GO:0005515
Dod03g3316 458 PANTHER CASKIN 29 446 - -
Dod03g3316 458 SUPERFAMILY Ankyrin repeat 19 425 IPR036770 -
Dod03g3316 458 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 29 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3316 Dod-Chr3 65836559 65841359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3316 343 426 Miscellaneous Gene Families AT5G50140 30.588 8.97e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3316 - - gmx:100811106 649.432