Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3312 ATGAAGAACATCAACATGATCTCTTTGTGCATGCTTCTCATAGCACTGTTGCACTTAGGCTTAGGGGCAAGCGTACCCTCGAGCTTCAACTATGGTGATGCCCTTGACAAGAGCTTGATGTTCTTTGAAGCACAAAGGTCTGGTAAATTGCCACCTCAGCAGCGAGTCAAGTGGCGTGGTGATTCTGGTCTCAACGATGGATTTCAGCAAGGAGTAGACCTGGTGGGTGGGTACTATGATGCTGGAGATCATGTGAAGTTTGGGCTGCCAATGGCATACACTGTGACAATGCTTGCATGGGGAGCCATTGAGTTCAGGAAGGAAATCACAGACTTGAACCAAATGGGACACACATTATGGGCCATTAGATGGGGAACTGACTACTTCATCAAAGCACATCCTCAGCCTAATGTTCTTTGGGGACAGGTGGGTGATGGAGCCTCTGATCACTACTGCTGGGAGCGTGCTGAAGACATGACAACTTCAAGAACTGCATACAAAATTGATGAGGAGCACCCTGGCTCTGATCTTGCAGGTGAAACAGCAGCTGCATTGGCCGCAGCAGCCATAGCTTTCAGGCCCTACAACTCTTCTTACTCTAGCCTCCTGCTAGCTCATGCACAACAGCTCTTCACATTCGCAGACAGGTTCAGAGGTTTATATGATGACTCCATAGCTTGTGCTCAGCAATTCTATACTTCTTCTGGTTACTCAGATGAATTGTTATGGGCTGCTGCCTGGCTGCATCAAGCAACTGGTGATGAATACTACCTAAAGTATGTAGTGGACAATGCTGTTTATATGGGTGGAACTGGCTGGGCAGTAAAAGAGTTCTCTTGGGACAACAAATATGCTGGTGTGCAGATCCTCCTGTCAAAGGTATTACTGGAAGGAAATGCTGGTTCTTACGCCTCTACACTGAAGCAGTACCAGGCCAAGGCAGATTATTTTGCCTGCGCGTGCTTGCAAAAGAATGATGGTTACAATGTCCAGAAAACTCCAGGTGGCTTAGTATACGTGCGTGATTGGGACAACATGCAGTATGTTACTTCTGCTGCATTTCTTTCAACTGTGTACTCTAATTATCTCTCAGCTGCAAAAACACAGCTCAACTGTCCAGAGGGTCAAGTTCAGCCTCAGGAGCTCCTCAATTTCGCAAAGTCACAGGCTGACTACATCCTTGGTGAAAACCCCAAGGGTATGAGCTACTTGGTTGGATATGGACAAAACTATCCTCTACATGTTCACCACAGAGGGGCTTCCATTGATTCAATCTTTGTTCTTCAGTCAGAGGTTGGCTGCATCCAAGGATTCGAGGCATGGTATAGCCGCCCTGAGCCGAATCCTAATGTCATTTGTGGTGGCCTTGTTGGAGGTCCCGATAAGAATGATGACTTCTCTGATGACAGATCCAATTATGAACAAACTGAGCCTACACTTTCAGGATCTGCCCCTCTTGTAGGCATCTTTGCGAAGCTGCAGAGTTTATATGGCAAACCAGGTTCCTACCATAATCAATCACCAGTGCCCCAGCCCAAAACACCAAGTACAACATACTCGGGGAAAACACCAGCACCTAAAACATCACAAGATGCCCCGGTTGAGTTCCTTCACTCAATTACTAGCTCGTGGACTGTTGGAGCTACAACTTATTATCGCCACAAGGTGATAGTCAAGAACACTTCTGAGAAGCCAATCACAGATCTTAAGTTGGTGATTGCGAATCTCTCAGGTTCTATATGGGGTCTCTCTCCAACAACAGAGAAGAACACCTATGAACTTCCCCAGTGGCTCAAGGTCTTGAACCCTGGCTCAGAGTGTATATTTGTTTATGTTCAAGAAGGACCCCAGGCAAAAATCTCCATCCAAAGCTTCCACTGA 1881 0.4668 MKNINMISLCMLLIALLHLGLGASVPSSFNYGDALDKSLMFFEAQRSGKLPPQQRVKWRGDSGLNDGFQQGVDLVGGYYDAGDHVKFGLPMAYTVTMLAWGAIEFRKEITDLNQMGHTLWAIRWGTDYFIKAHPQPNVLWGQVGDGASDHYCWERAEDMTTSRTAYKIDEEHPGSDLAGETAAALAAAAIAFRPYNSSYSSLLLAHAQQLFTFADRFRGLYDDSIACAQQFYTSSGYSDELLWAAAWLHQATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKVLLEGNAGSYASTLKQYQAKADYFACACLQKNDGYNVQKTPGGLVYVRDWDNMQYVTSAAFLSTVYSNYLSAAKTQLNCPEGQVQPQELLNFAKSQADYILGENPKGMSYLVGYGQNYPLHVHHRGASIDSIFVLQSEVGCIQGFEAWYSRPEPNPNVICGGLVGGPDKNDDFSDDRSNYEQTEPTLSGSAPLVGIFAKLQSLYGKPGSYHNQSPVPQPKTPSTTYSGKTPAPKTSQDAPVEFLHSITSSWTVGATTYYRHKVIVKNTSEKPITDLKLVIANLSGSIWGLSPTTEKNTYELPQWLKVLNPGSECIFVYVQEGPQAKISIQSFH* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3312 626 MobiDBLite consensus disorder prediction 501 531 - -
Dod03g3312 626 Gene3D - 26 507 IPR012341 GO:0005975
Dod03g3312 626 MobiDBLite consensus disorder prediction 454 480 - -
Dod03g3312 626 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 392 418 IPR018221 -
Dod03g3312 626 SMART CBM49_2 534 616 IPR019028 GO:0030246
Dod03g3312 626 Pfam Glycosyl hydrolase family 9 31 489 IPR001701 GO:0004553|GO:0005975
Dod03g3312 626 PANTHER ENDO-1,4-BETA-GLUCANASE 7 581 - -
Dod03g3312 626 MobiDBLite consensus disorder prediction 501 527 - -
Dod03g3312 626 PANTHER ENDOGLUCANASE 5 7 581 - -
Dod03g3312 626 Pfam Carbohydrate binding domain CBM49 535 613 IPR019028 GO:0030246
Dod03g3312 626 SUPERFAMILY Six-hairpin glycosidases 28 502 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3312 Dod-Chr3 65780293 65784406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3312 29 626 Glycoside Hydrolase AT1G48930 69.333 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3312 K01179 - gmx:100802420 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3312 03 65780293 65784406 Dod03g3312 03 65780293 65784406 ECH