Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3310 ATGGGCAAATCCAGCAAGAAATCAGCATCCAAAGTTGGCGCCGCTCCAGCTGTAGTTCCGACTTCGAAGACTCCCAAAAAGGGCAAGAGGCAGGCTGATGAGGAACTTGAGAAGCAAGTCAGTGCAAAGAAGCAAAAGATAGAAGAGGTTGCTCAGAAGCAGAAGAAAGAAGTGAAGGGGCAAAAGAAGAAGGAAGAAAGTAGTTCAGATGATTCTTCTTCAGAATCTGAAGATGAGAAACCTGCAGCAAAAGTGGCTTTAAAAAAGCAACCGGCTAAGAACGGCACTTTGGCAAAGAAAACCAAGCCAGCTAGCAGTTCTAGCTCTTCCGATTCATCAGACTCTTCTGATTCTGAAGATGAGAAACCTGCAGCTAAAGTTGCTGTTCCTTCAAAAAATCAGCCTGCTAAAAATGGCACTCTAGCAAAGAAAGGCAAGCCAGCTACCAGTTCCAGTTCGTCTGAATCCTCTGATGATGACTCTGAAGAAGATGAAGCACCGAAATCAAAGGTGGTCCCAACTGCAGGGAAGAACGGACCTGCTTCTGCACAGAAGAACATTCAGCCAATTGAAAGCTCTGACAGTGATAGTGATGAGTCTGAAGAGAGCAGCTCTGATGAGGACAATGTATCCAAGAAGTTGCCTGCCAAGAATGTGCCTGCTAAGAAGGTTGAATCAGACTCAACTTCTGATAGTAGCTCAGATGAAGATGATAATGAGAAAAAACCAGTAGCCAAAAAGTTGCCTGCTCCAGCAGCTGCTCCAACCAAGAAGGTTGAGACCAGTGAAAGCTCAGAAGACGAGTCAAGTGAAAGCTCGGAAGATAATGATCCAAGGCTTATTGTAAATGCTGTGTCCAAGCCTCCTGCTGTTGCAAAGCAGGATGATGATAGTTCAGATTCTGATGATAGCAGCTCTGATGAAGACAATAAACCTGCTGTCAAGCCTGTATCCAATGTCAAGTCAGCACCTGCACCTGTGAAGAAGGCTCGTAGTTCCGATGAGACTGATTCAGATGATGATGATGATGACTCCTCTGACAGTGACTCTCAGAATGAAAAGAAAACTGCTAAAGTTTCTAATGGTAACAAAAAGCCAGCACCTGTTTTGAAGACAGCTAACAAGAAATCGAGTGAAAGTTCCTCAGAGAGTGATTCTTCAGCTGATGAGGGTAAGATGGATATTGATGAGGATGATAGTTCTGATGAAAGTGATGAGGAGCCTCAAAAGAAAAAGCCTGTGAAAGCTTTGAAAGATAGCAGTGACGGTACTGAGAGTTCAGATGACAGTGAGGAAGATGAGAAGCCCTCTAAAACTCCTCAGAAACGTGCTAAGGATGTGGAGATGGTTGATGCTAACTCAGCTGGAAAGAAAGCTCCTAAAACCCCAGCTACACCTAAAGAACAAAATACTGGATCAAAGACGCTGTTTGTTGGAAACTTGTCATTTAGTGTGCAACGAGAAGATGTGGAAAATTTCTTCAAAGATTGTGGAGAAGTTGTTGATGTGCGTTTGTCTAGTGATGATACTGGGAAGTTTAAAGGCTTTGGACATGTTGAGTTTGCTACGGCAGAGGCAGCCCAAAAAGTAAAGTTTTGTACCTCGTATATATATAATCCATGA 1623 0.435 MGKSSKKSASKVGAAPAVVPTSKTPKKGKRQADEELEKQVSAKKQKIEEVAQKQKKEVKGQKKKEESSSDDSSSESEDEKPAAKVALKKQPAKNGTLAKKTKPASSSSSSDSSDSSDSEDEKPAAKVAVPSKNQPAKNGTLAKKGKPATSSSSSESSDDDSEEDEAPKSKVVPTAGKNGPASAQKNIQPIESSDSDSDESEESSSDEDNVSKKLPAKNVPAKKVESDSTSDSSSDEDDNEKKPVAKKLPAPAAAPTKKVETSESSEDESSESSEDNDPRLIVNAVSKPPAVAKQDDDSSDSDDSSSDEDNKPAVKPVSNVKSAPAPVKKARSSDETDSDDDDDDSSDSDSQNEKKTAKVSNGNKKPAPVLKTANKKSSESSSESDSSADEGKMDIDEDDSSDESDEEPQKKKPVKALKDSSDGTESSDDSEEDEKPSKTPQKRAKDVEMVDANSAGKKAPKTPATPKEQNTGSKTLFVGNLSFSVQREDVENFFKDCGEVVDVRLSSDDTGKFKGFGHVEFATAEAAQKVKFCTSYIYNP* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3310 540 MobiDBLite consensus disorder prediction 1 473 - -
Dod03g3310 540 PANTHER BNAA08G02930D PROTEIN 431 529 - -
Dod03g3310 540 Coils Coil 29 64 - -
Dod03g3310 540 MobiDBLite consensus disorder prediction 133 155 - -
Dod03g3310 540 MobiDBLite consensus disorder prediction 390 404 - -
Dod03g3310 540 Gene3D - 371 533 IPR012677 -
Dod03g3310 540 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 474 540 IPR000504 GO:0003723
Dod03g3310 540 MobiDBLite consensus disorder prediction 99 113 - -
Dod03g3310 540 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 476 531 IPR000504 GO:0003723
Dod03g3310 540 MobiDBLite consensus disorder prediction 293 310 - -
Dod03g3310 540 MobiDBLite consensus disorder prediction 179 193 - -
Dod03g3310 540 MobiDBLite consensus disorder prediction 405 424 - -
Dod03g3310 540 SMART rrm1_1 475 538 IPR000504 GO:0003723
Dod03g3310 540 MobiDBLite consensus disorder prediction 26 86 - -
Dod03g3310 540 MobiDBLite consensus disorder prediction 431 452 - -
Dod03g3310 540 SUPERFAMILY RNA-binding domain, RBD 464 531 IPR035979 GO:0003676
Dod03g3310 540 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 431 529 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3310 K11294 - ahf:112789008 348.591