Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod03g3297 | ATGGCTTCACCTGCGTGGTTGCCCCAAGACCCACACCCACAGCCACCCCGTTCTCAAATTCCCGTTTCTTCCACCACAAATTCTGCTCCTTCTCCCGCTCCAGCAGCTGTACCGGCTGCGTCATTCTCTTACGGATTGCATCAAAATGTGAACGCCTCTGCAAATTCTCAGCAGCCGTCGGCGCACCCTGCGATGAAGTCTAATTCGTCGGTGATTCCCATGGCTGTTCAACCACCAGTTCCTGGCCTCCCTTCTCATGCTGCCCCTTCATTTTCATATAACGTATTGCAAGGTGGTGCAGCTTTTCCCACCAATCAGCATACACAACCTAGCACGAATATGCTAGATTCTGTAGCAAAGGATGTTAGTAAAGTGTCATCTGCATCGGGTATCCTGCATTCTGCTCCAGCTCATACTTCAACATCCACAATGCCTCCACCATCTGACCCCAACTTTCGCCCTCCTACTCCATGGAATCCAGCTGCCCTCTCTTTTCCTGCCCATCCTGTAATGCTTGGAACTCCTGGGAATCCTGCCCCCCCTGGATTAACATCTGCTTCAGTTGTATCCTCCAATCCTGCTGCTCCTCCCACAAGCACAGATTCTTTCTCATCAGCACCACTGAGACCAAATATGCCTGCTGCAGCTATTGTATCAGATCCTACTGCCCAACAGAAAGGCATACCTTATCCATCCTTGCCTGCTATGGCTGCTCCACCGCCTCAGGGATTTTGGTTGCAACCTCCGCAGATGAGTGGTGTCCTTAGGCCACCATTTCTTCAATATCCCACTCCTTTTCCTGGTCCCTTTCCGTTTCCAGCACGTGGTGTTAGTCTGCCGGCTGTTTCAGTCCCTGATTCTCAACCCCCTGGTGTTACACCTGTGAGTGCTACTGGTGCAACTTCTGCACCTCCTGCTTCCAGTCCTCAGCTGAGGGGAGCCACTGGTTTGCAGACAGAAGTAATTTCCGAGCATGCTGATGACAAGAAGAAATCTAATGCTATACAGAAGGAGGATGCTGCTAGTGATAAGCTGGATGCCTGGACAGCCCACAAGACTGAAACAGGAATTGTATACTATTATAATGCCTTGACAGGAGAATCAACATATGAAAAACCTGCCTGCTTTAAAGGCGAGCCTTACCAAGTTTCTGTGCAGCCAACTCCAGTTTCAATGGTGAATGTACCTGGTACTAATTGGATGTTGGTCTCCACTAGTGATGGGAAGAAATATTACTACAACAATCAAACCAAGACAAGCTGCTGGGAAATACCCAATGAGGTGGCTGAATTGAAAAAGGAGCAGGATGGTGATGTCGCAAAAGATCATTTAATGTCAGTTCCAAATACTAATGTATTGTCTGATAGAGGGTCTGCAATGGTTACTCTGAATGCTCCTGCTATTAATACTGGTGGTCGTGATGCTGCAGCTCTCAAACCCTCTAGTGTACAGAGCTCATCATCGGCACTGGATTTGATCAAGAAGAAGTTGCAGGACTCGGGAACACCTGTTACTTCCTCTTCTGTTCCTGTGCCATCGGTACAAACAGGATCTGAATCAAATGGTTCAAAAGCAGCTGAATCTGCAGCTAAGGGCCTGCAAAATGATAATAACAAAGATAAACAAAAAGATGCTGATGGTGATGCTAACACCTCTGACACATCCTCAGATTCAGAAGATGAAGATAGTGGACCTTCAAAGGAGGAGTGCATCATTCAATTCAAGGAGATGCTTAAGGAGCGAGGAGTGGCACCATTCTCAAAGTGGGAGAAAGAACTACCAAAGATAGTATTTGATCCACGTTTCAAGGCCATACCAAGTTATTCTGCTAGGCGGTCCTTGTTTGAGCATTATGTTAAAACTCGTGCGGAAGAAGAACGCAAAGAAAAGCGTGCTGCACAGAAGGCTGCAATCGAGGGATTTAAGCAGTTACTGGATGAAGCCTCAGAGGATATAGATCAAAATACCGATTATCAGTCTTTTCGAAAGAAATGGGGAAATGACCCGCGATTTGAGGCATTGGACCGCAAGGAACGGGAGCACTTATTGAGTGAAAGAGTGCTTCCTTTGAAGAAAGCTGCTGAAGAAAAGGCTCAAGCAATGCGCATAGCTGCTACTGCTAGTTTTAAGTCAATGCTTAAAGAACGAGGCGATATATCTTTTAACTCCCGTTGGTCCAGGGTTAAAGAAAGTTTAAGAGATGACCCAAGATATAAATCTGTGAGACATGAGGATAGGGAAATTTTGTTCAATGAGTATGTATCTGAATTAAAAGCTGTTGAACATGCAGCTGAACGAGAGAACAAAGCCAGAAGGGACGAGCAGGATAAGCTGAGGGAGAGGGAACGGGAGCTTCGCAAAAGGAAGGAAAGAGAGGAGCAGGAAATGGAAAGGGTGCGACTGAAAATTCGAAGAAAGGAAGCAATTACTTCTTTTCAAGCTTTGCTTGTGGAGACAATCAAAGATCCTTTGGCATCATGGACGGAATCTAAGCCTAAGTTAGAAAAGGATCCTCAAGGACGTGCAACTAATCCAGATCTTGATGCGGCTGAAACTGAAAAGCTGTTTCGGGAACATGTAAAGATGCTTCAGGAACGTTGTGCACACGAATTTAGAGCTCTTTTAGCTGAAGTATTGACTTCTGATGCCGCATCCCAAGAAAGTGAAGATGGGAAAACAGTTCTTAATTCATGGTCCACTGCTAAGCGTCTTTTAAAATCTGATCCAAGATATAACAAGGTTCCGAGAAAAGACAGGGAAGCCTTGTGGCGCCGGTATTCAGAAGATATATTGCGGCGGCAAAAGTCATCCCATGAAGACAAACAAACAGATTCCAAGGGCAAAAACTCTTTAGAATCTGCTAAGCTTTCATTGGAATCGGGGAGATCTCATGATAGAAGATGA | 2904 | 0.4587 | MASPAWLPQDPHPQPPRSQIPVSSTTNSAPSPAPAAVPAASFSYGLHQNVNASANSQQPSAHPAMKSNSSVIPMAVQPPVPGLPSHAAPSFSYNVLQGGAAFPTNQHTQPSTNMLDSVAKDVSKVSSASGILHSAPAHTSTSTMPPPSDPNFRPPTPWNPAALSFPAHPVMLGTPGNPAPPGLTSASVVSSNPAAPPTSTDSFSSAPLRPNMPAAAIVSDPTAQQKGIPYPSLPAMAAPPPQGFWLQPPQMSGVLRPPFLQYPTPFPGPFPFPARGVSLPAVSVPDSQPPGVTPVSATGATSAPPASSPQLRGATGLQTEVISEHADDKKKSNAIQKEDAASDKLDAWTAHKTETGIVYYYNALTGESTYEKPACFKGEPYQVSVQPTPVSMVNVPGTNWMLVSTSDGKKYYYNNQTKTSCWEIPNEVAELKKEQDGDVAKDHLMSVPNTNVLSDRGSAMVTLNAPAINTGGRDAAALKPSSVQSSSSALDLIKKKLQDSGTPVTSSSVPVPSVQTGSESNGSKAAESAAKGLQNDNNKDKQKDADGDANTSDTSSDSEDEDSGPSKEECIIQFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEASEDIDQNTDYQSFRKKWGNDPRFEALDRKEREHLLSERVLPLKKAAEEKAQAMRIAATASFKSMLKERGDISFNSRWSRVKESLRDDPRYKSVRHEDREILFNEYVSELKAVEHAAERENKARRDEQDKLRERERELRKRKEREEQEMERVRLKIRRKEAITSFQALLVETIKDPLASWTESKPKLEKDPQGRATNPDLDAAETEKLFREHVKMLQERCAHEFRALLAEVLTSDAASQESEDGKTVLNSWSTAKRLLKSDPRYNKVPRKDREALWRRYSEDILRRQKSSHEDKQTDSKGKNSLESAKLSLESGRSHDRR* | 968 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod03g3297 | 967 | Coils | Coil | 757 | 809 | - | - | |
| Dod03g3297 | 967 | Pfam | WW domain | 347 | 373 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | Pfam | WW domain | 399 | 425 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 534 | 550 | - | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Dod03g3297 | 967 | ProSiteProfiles | FF domain profile. | 805 | 862 | IPR002713 | - | |
| Dod03g3297 | 967 | Gene3D | FF domain | 863 | 929 | IPR036517 | - | |
| Dod03g3297 | 967 | Gene3D | FF domain | 802 | 862 | IPR036517 | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 126 | 208 | - | - | |
| Dod03g3297 | 967 | CDD | WW | 405 | 427 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | SUPERFAMILY | WW domain | 399 | 430 | IPR036020 | GO:0005515 | |
| Dod03g3297 | 967 | SUPERFAMILY | FF domain | 695 | 759 | IPR036517 | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 763 | 792 | - | - | |
| Dod03g3297 | 967 | ProSiteProfiles | FF domain profile. | 567 | 621 | IPR002713 | - | |
| Dod03g3297 | 967 | ProSitePatterns | WW/rsp5/WWP domain signature. | 400 | 425 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR HOMOLOG | 117 | 958 | - | - | |
| Dod03g3297 | 967 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 400 | 427 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 498 | 533 | - | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 50 | 74 | - | - | |
| Dod03g3297 | 967 | SUPERFAMILY | FF domain | 562 | 627 | IPR036517 | - | |
| Dod03g3297 | 967 | SUPERFAMILY | FF domain | 798 | 867 | IPR036517 | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 289 | 317 | - | - | |
| Dod03g3297 | 967 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR 1 | 117 | 958 | IPR045148 | GO:0003712|GO:0070063 | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 932 | 967 | - | - | |
| Dod03g3297 | 967 | Gene3D | FF domain | 691 | 770 | IPR036517 | - | |
| Dod03g3297 | 967 | Gene3D | FF domain | 552 | 632 | IPR036517 | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 50 | 77 | - | - | |
| Dod03g3297 | 967 | Gene3D | FF domain | 633 | 690 | IPR036517 | - | |
| Dod03g3297 | 967 | SUPERFAMILY | FF domain | 626 | 695 | IPR036517 | - | |
| Dod03g3297 | 967 | SMART | ww_5 | 395 | 427 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | SMART | ww_5 | 343 | 375 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 126 | 146 | - | - | |
| Dod03g3297 | 967 | ProSiteProfiles | FF domain profile. | 634 | 689 | IPR002713 | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 322 | 343 | - | - | |
| Dod03g3297 | 967 | SUPERFAMILY | WW domain | 347 | 377 | IPR036020 | GO:0005515 | |
| Dod03g3297 | 967 | SUPERFAMILY | FF domain | 857 | 935 | IPR036517 | - | |
| Dod03g3297 | 967 | SMART | FF_2 | 702 | 756 | IPR002713 | - | |
| Dod03g3297 | 967 | SMART | FF_2 | 805 | 862 | IPR002713 | - | |
| Dod03g3297 | 967 | SMART | FF_2 | 567 | 621 | IPR002713 | - | |
| Dod03g3297 | 967 | SMART | FF_2 | 634 | 689 | IPR002713 | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 180 | 207 | - | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 283 | 343 | - | - | |
| Dod03g3297 | 967 | CDD | WW | 348 | 373 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | Gene3D | - | 325 | 385 | - | - | |
| Dod03g3297 | 967 | Gene3D | - | 386 | 442 | - | - | |
| Dod03g3297 | 967 | Pfam | FF domain | 807 | 859 | IPR002713 | - | |
| Dod03g3297 | 967 | Pfam | FF domain | 637 | 683 | IPR002713 | - | |
| Dod03g3297 | 967 | Pfam | FF domain | 705 | 753 | IPR002713 | - | |
| Dod03g3297 | 967 | Pfam | FF domain | 573 | 618 | IPR002713 | - | |
| Dod03g3297 | 967 | Pfam | FF domain | 870 | 926 | IPR002713 | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 932 | 948 | - | - | |
| Dod03g3297 | 967 | ProSiteProfiles | FF domain profile. | 702 | 756 | IPR002713 | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 147 | 162 | - | - | |
| Dod03g3297 | 967 | MobiDBLite | consensus disorder prediction | 498 | 570 | - | - | |
| Dod03g3297 | 967 | ProSitePatterns | WW/rsp5/WWP domain signature. | 348 | 373 | IPR001202 | GO:0005515 | |
| Dod03g3297 | 967 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 342 | 375 | IPR001202 | GO:0005515 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod03g3297 | K12824 | - | gmx:100816454 | 1365.9 |