Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3282 ATGCCGAAGCTCTGTGACTTGCAAATCAACATTGATGGTCGGCAGATATTCCTGTTGAAAGAGAAGGTTATATCAAAATACTGTGGAAAGTTGAAGAGAATCTTGAATCATCAAAAGAAATGTCATGTGAAGAACTTGGGGATTAGAATCAATGATTTCCCTGGAGGTCCAGATGGGTTTGAGCTGGTTTCAAGGTTTTGTTACAACAATGGTAACATCCCAATCACTGTAGCTAATGTGTCTCTCCTCTATTGCTGTGCTGTTTATCTCGGAATGACTGAGGAGGTCTTCAGCAACAATCTCTTGCAACAAACAGAAATTCTCCTTGAGGGAATCTATTACTGGAAATGGAATGACATACTTGTAAGCCTCATGAGATGTGAGCCGGTTTTTGCATATGCAGATTCCTATGGTCTATTAGAGAGGATCATTTGTGCAGTCCTGGCAAAGATTACGCAGAATCCGGATGTGAGCCTCCTCACTTCATGCTCTTCATCATCATCATATTCTTCTCCAGAAAGCAAGTCTAGTAAGATATTCTCTTCTTCAACCAAAGCCACCCCAGAGAAAATTAAGGCAACTTTGCCAAGCAAAGCATGGTGGTTTGATGATTTGGCAACTTCACCCCCAAAGATCATTGAGAAACTATTTCAGATTATTGGTGCATACAAAGCTGATAACAACAACTTAATCCTCACCAGATTTCTGTTGCATTATCTGAAAAAAGCTACTCAAAAAAGAGTTGTTGATTGCAGAAACTGCAGTGAGTATGCTGCTCTTGCAGAAACAGCTGCTTATGGGGTCATATTTGTTGGTAAGGAGACATTTTCTTGCAGAGGCCTTTTTTGGGTACTGAGGATTGTATCTGGCTTTGGATTGAGTAAAGGTTGCAGGATGGAACTTGAGAAATTGATTGGTGGGGTGCTTGAACAAGCCACTTTGGATGATCTTCTGGTCTCTGGACATTATATGGGAGTCCATTATGATGTTAATTTGGTGATAAGATTGGTTAGACTATTTGTTGGTATCAATGGTTCTGATGGGGTGTCTTCACAGAAATTGAAAAGGGTAGGTAGATTGATTGACAAGTATTTGAGGGAGATATCACCTGACCAGAACCTTAAGATCTCTAAATTTCTTGGAGTAGCAGAATGCTTGCCAGATTCTGCAAGGGATAGCTTTGATGGGGTCTATAGAGCCATTGACATCTATCTTGAGTCTCATCTAATGATCACATTTGAGGAAAGCTCCAGACTGTGTAGATGCCTTAATTACAGAAAACTCAGCTTTGAAGCTAGTAAAGACCTAGCCAAGAACCCCAGAATACCTCCAAGGATTGCAATGCAGGCTCTTATTTCTCAACAATCAAAAATTCCAACAACGAACGACTCTGAAACAGAGTCTCCAAGGATGAACCCTTACCAGTTAGTTTTGTGCAATGAAGCTAACAGGGACAGCTTCTCCCCAGAGAAAAAGGATATGACCCTAAACATGGAGAAAATGCAATGGAGGGTAGTAGAACTAGAGGAATTATGCAAGGAAATGAACGGTCAGATGTCAAAATTGGTTAACCGCAATCTCATCCTTAATCCTGCTCGTGCTAGAGCCTCCCCAAGATTTTGCTGA 1626 0.409 MPKLCDLQINIDGRQIFLLKEKVISKYCGKLKRILNHQKKCHVKNLGIRINDFPGGPDGFELVSRFCYNNGNIPITVANVSLLYCCAVYLGMTEEVFSNNLLQQTEILLEGIYYWKWNDILVSLMRCEPVFAYADSYGLLERIICAVLAKITQNPDVSLLTSCSSSSSYSSPESKSSKIFSSSTKATPEKIKATLPSKAWWFDDLATSPPKIIEKLFQIIGAYKADNNNLILTRFLLHYLKKATQKRVVDCRNCSEYAALAETAAYGVIFVGKETFSCRGLFWVLRIVSGFGLSKGCRMELEKLIGGVLEQATLDDLLVSGHYMGVHYDVNLVIRLVRLFVGINGSDGVSSQKLKRVGRLIDKYLREISPDQNLKISKFLGVAECLPDSARDSFDGVYRAIDIYLESHLMITFEESSRLCRCLNYRKLSFEASKDLAKNPRIPPRIAMQALISQQSKIPTTNDSETESPRMNPYQLVLCNEANRDSFSPEKKDMTLNMEKMQWRVVELEELCKEMNGQMSKLVNRNLILNPARARASPRFC* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3282 541 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 515 - -
Dod03g3282 541 ProSiteProfiles NPH3 domain profile. 199 457 IPR027356 -
Dod03g3282 541 PANTHER OS12G0117600 PROTEIN 2 515 IPR043454 -
Dod03g3282 541 SUPERFAMILY POZ domain 3 94 IPR011333 -
Dod03g3282 541 Coils Coil 491 525 - -
Dod03g3282 541 Pfam NPH3 family 200 433 IPR027356 -
Dod03g3282 541 Gene3D Potassium Channel Kv1.1; Chain A 1 101 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3282 Dod-Chr3 65514342 65517233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3282 6 523 EF-hand Containing Proteins AT3G44820 26.178 1.83e-53 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3282 - - adu:107477162 835.484