Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3273 ATGCCTCGGTCAGCTCCTTCATTAACCACTTCTTCAGTCGTGAAATTTCGCTTCGAAGGTTTGTGGTTCGCTTCTTTCAGATTTGGTTTTAAAGCCGAAGCTTTATCCTATGATCACACTGTCAGCATTGAATGCTTGCCACACCCTCATAATCCTCAGTATAATGGAGGAATAATCGAAAATCCTGAACTGAATAATGGATTAAAAGGGTGGACTGCATATGGTGGTTCAATGATAGAACATAGGGAATCATCAGGCAACAAATATGTTGTAGCATATGCCAGGAATCAACCTCATGATAGTGTCTCCCAAAAGATCTTCCTGCTGAATAAGAGGCATTATACTTTGTCCGCTTGGATACAAGTGACTGAGGCAAGTGTTCTAGTAACAGCAGTTATCAAAACAAGTAAAGGTCTTAAATTTGCTGGTGCCACTATTGCTGAGCCTAATTGCTGGTCTATGCTTAAGGGTGGCTTCTCACCAGATACAGCAGGAACTGCTGAGCTATATTTTGAGAGCAATAATACTGCTGTGGAAATATGGGTCGACAGCATTTCCTTGCAACCATTTACAGAAAAGCAATGGAGGTCTCACCAAGTTCAGAATATTGAGAAGGCACGCAAGAGGAAGTTATCAGTCCAAATAGTGGATCAACAAGGAATGCCCCTACCAAATGCAAGTGTATCTTTTGTACAGACAAGGCCACACTTTCCATTTGGAAGTTCAATAGACAAGTACATCCTCAACAATAGTGCATACCAAAATTGGTTTCTCCCTAGGTTCACAGTCACCACATTTGGAAATGAAATGAAGTGGTACAGTACCGAAAGCGTGCAAGGCCATGAAGACTACTCACAAGCTGATGCCATGCTACAATTTGCCAAGAATCACAACATTTCTGTCCGGGGCCACAACATATTTTGGGATGATCCTAATTTCCAACCTAGTTGGGTTCCTTCACTCTCACCACAGCAGCTTAACTCATCAGTGGAAAAGAGGCTGAATTCTGTTGTGTCAAGATACAAGGGCCAAGTTATTGCTTGGGATGTTGTGAATGAAAACTTGCACTTCTCATTCTTTGAAAGTAAACTTGGACAGAATTTTTCAGCCAGGGTCTTCAATGAGGCTCACAAGATTGATGGACACCCCACTTTATTCCTGAATGATTATAATACCATTGAGGATAGTAGAGATGGTGCATCAAACCCAATAAAGTACATCCAGAAGCTCAGAGAGATTCAAAGCTATCCTGGGAATGGAGGAATGCGTATTGGAATTGGGCTGGAGGCCCATTTTCCTAATTCCCCTCCTAACTTGCCTTACATGAGAGCTTCCATTGATACCCTTGCAGCCACTGGTTCACCAATTTGGATAACAGAAATAGATGTTCAATCCCAACCTAACCAGGTAGGGCACTTTGAGCAGGTTCTGAGAGAAGCACAATCCCATCCAGAAGTTGATGGAATTATAATGTGGACAGGGAGGACGCCGCAAGGTTGCTATAGGATTTGCTTAACGGATGACAATTTCAAGAACTTGCCAGCGGGGGATGTTGTGGACAATCTGCTTCGTGAGTTGGGGTTAGGAAGATTATCACGAAACACAGACCAAAATGGGTTCCTGGAGGCCTCCCTTTTCCATGGCGATTACAAAGTGGAGATCGAGTACACTAAGAAGAATTACTCTTTCGCTCACAACCTACAGGTGACCCCAATAGATGAGTCCGAGAAAACAAAAACACAAGTTATAAAACTTTCTATATAG 1764 0.4257 MPRSAPSLTTSSVVKFRFEGLWFASFRFGFKAEALSYDHTVSIECLPHPHNPQYNGGIIENPELNNGLKGWTAYGGSMIEHRESSGNKYVVAYARNQPHDSVSQKIFLLNKRHYTLSAWIQVTEASVLVTAVIKTSKGLKFAGATIAEPNCWSMLKGGFSPDTAGTAELYFESNNTAVEIWVDSISLQPFTEKQWRSHQVQNIEKARKRKLSVQIVDQQGMPLPNASVSFVQTRPHFPFGSSIDKYILNNSAYQNWFLPRFTVTTFGNEMKWYSTESVQGHEDYSQADAMLQFAKNHNISVRGHNIFWDDPNFQPSWVPSLSPQQLNSSVEKRLNSVVSRYKGQVIAWDVVNENLHFSFFESKLGQNFSARVFNEAHKIDGHPTLFLNDYNTIEDSRDGASNPIKYIQKLREIQSYPGNGGMRIGIGLEAHFPNSPPNLPYMRASIDTLAATGSPIWITEIDVQSQPNQVGHFEQVLREAQSHPEVDGIIMWTGRTPQGCYRICLTDDNFKNLPAGDVVDNLLRELGLGRLSRNTDQNGFLEASLFHGDYKVEIEYTKKNYSFAHNLQVTPIDESEKTKTQVIKLSI* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3273 587 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 225 522 IPR001000 GO:0004553|GO:0005975
Dod03g3273 587 SUPERFAMILY (Trans)glycosidases 222 525 IPR017853 -
Dod03g3273 587 Pfam Glycosyl hydrolase family 10 235 492 IPR001000 GO:0004553|GO:0005975
Dod03g3273 587 Gene3D Glycosidases 225 531 - -
Dod03g3273 587 SUPERFAMILY Galactose-binding domain-like 55 188 IPR008979 -
Dod03g3273 587 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 453 463 IPR031158 -
Dod03g3273 587 Gene3D - 47 190 - -
Dod03g3273 587 SMART glyco_10 270 523 IPR001000 GO:0004553|GO:0005975
Dod03g3273 587 PANTHER GLYCOSYL HYDROLASE 29 576 IPR044846 GO:0004553|GO:0005975
Dod03g3273 587 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE 29 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3273 Dod-Chr3 65456212 65461311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3273 33 579 Glycoside Hydrolase AT4G33840 54.000 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3273 - - gmx:100775272 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3273 03 65456212 65461311 Dod03g3273 03 65456212 65461311 ECH