Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3261 ATGGATCTCTTGTCCACCTCGTACTCCACTCTCATTGTCCTCCTCCTACTCCTCACACTCGCACCTCAAGGTGTTTTGGGTGCTACCTTCACATTCGTGAACAAATGCGACTACACAGTCTGGCCAGGCATACTCGCAAATGCCGGCAGCCCTCCTCTCGACAGCACCGGTTTCGAGCTCCCAAAGGAAACTTCTAGAACCTTCCAAGCCCCCACCGGTTGGTCCGGCCGCTTCTGGGGCCGAACCTCCTGCAACTTCGACAGCTCCGGATCCGGCTCCTGCCTCACCGGCGACTGCGGCTCCGGCCAGATCGAGTGCAACGGCGCCGGCGCCGCCCCTCCCGCCACCCTAGCGGAGTTCACGCTCGGAACCGGCGGCCAGGACTTCTATGACGTCAGCCTCGTCGACGGCTACAACCTCCCGATGATCGTGGAAGGCACTGGCGGGTCGGGTCAGTGCGCGTCCACCGGGTGCACTTCGGATCTGAACCAGCAGTGCCCTTCGGAGCTTAAGGCGTTGGACGGCAGCGCGTGTAAGAGCGCGTGTGAGGCTTTTGGGAGCCCTGAGTACTGTTGCAGCGGCGCGTATGGGTCACCGGCTACTTGTAGGCCTTCTATTTACTCTGAGATGTTTAAGGCTGCTTGCCCTAGATCGTATAGCTACGCATACGATGATGCTTCGAGTACGTTTACGTGTACCGGTGCTGATTATACGGTCGCCTTTTGCCCATCCTCCCCGAGTCAGAAATCTTCAAGAGATCCAACCCCAGTGACATCAACAACACCCATAGGGTCAGGGACAGGCATAGGAACTGGGATAGGGACAGGAACAGGAACAGTAACAGGATCCGAAGGTTCAGGGGCAGTATACACGGGTGCTGACCCGGGTCTTGGATATTCATCAACTACTGGTACCGGGTCGGGTTCAGGATCCGGAGAGGCCATGCTGGCAGATGGATCATACTTAGCTGGTTTGGCCATGGGAGACTCACCTAGGAGTAGGACACTTCCCTCTGCATTTATCTATTCTGCTAGCTTTTTGCTTATTTTCTTCTTGCTTTAG 1062 0.5669 MDLLSTSYSTLIVLLLLLTLAPQGVLGATFTFVNKCDYTVWPGILANAGSPPLDSTGFELPKETSRTFQAPTGWSGRFWGRTSCNFDSSGSGSCLTGDCGSGQIECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGTGGSGQCASTGCTSDLNQQCPSELKALDGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKAACPRSYSYAYDDASSTFTCTGADYTVAFCPSSPSQKSSRDPTPVTSTTPIGSGTGIGTGIGTGTGTVTGSEGSGAVYTGADPGLGYSSTTGTGSGSGSGEAMLADGSYLAGLAMGDSPRSRTLPSAFIYSASFLLIFFLL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3261 353 ProSiteProfiles Thaumatin family profile. 27 243 IPR001938 -
Dod03g3261 353 PANTHER OS03G0233200 PROTEIN 8 268 IPR001938 -
Dod03g3261 353 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Dod03g3261 353 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Dod03g3261 353 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Dod03g3261 353 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Dod03g3261 353 PRINTS Pathogenesis-related protein signature 90 119 IPR001938 -
Dod03g3261 353 CDD TLP-PA 29 242 - -
Dod03g3261 353 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 8 268 - -
Dod03g3261 353 Pfam Thaumatin family 34 243 IPR001938 -
Dod03g3261 353 SMART tha2 30 243 IPR001938 -
Dod03g3261 353 SUPERFAMILY Osmotin, thaumatin-like protein 28 244 IPR037176 -
Dod03g3261 353 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Dod03g3261 353 Gene3D Thaumatin 28 243 IPR037176 -
Dod03g3261 353 MobiDBLite consensus disorder prediction 244 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3261 Dod-Chr3 65301465 65304080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3261 8 251 Receptor kinase-like Gene Family AT5G38280 49.213 2.47e-81 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3261 - - ahf:112789067 546.969