Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3245 ATGGTTCCTAACAGAAATTCAAAACAAGAGACCGTGCTTTTCTCTAAACATGTCTTCCCTTCCGGTACTACTGGACTTCCATATTGGCTAAGAGAGATCCCTAACATCATATTCCGCTCTAACAATGAACCCTTTAAGAGGTACATGAAAGAATTTGTGTCAACTATTATAGATAAGATGAAAGCGGAGAAGCTCTTTGCCTCCCAAGGAGGCCCCATCATTTTGACACAGATTGAGAATGAGTACAACCATGTTCAACTTGCTTATGACTTGGAGGGAGATAATTATGTCCAATGGGCTGCAAAAATGGCAGTGTCAATGGATACTGGAGTTCCATGGGTCATGTGCAAGCAAAAGGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCACTGCGGTGATACCTTCACAGGCCCAAACAAACCATACAAGCCTGCCATATGGACTGAAAACTGGACTGCTCAGTACCGAGTTTTTGGAGACCCACCATCCCAAAGATCAGCGGAAGATATTGCCTTCTCAGTTGCCCGCTTCTTCTCTAAGAATGGGTGCTTGGTCAACTACTATATGTATCATGGTGGAACAAATTTTGGTAGAACAAGCTCTGCCTTTTCAACAACCCGTTACTATGATGAAGCTCCACTTGATGAGTTTGGTCTACCAAGAGAACCAAAATGGAGTCATCTAAGGGACGTGCACAGGGCTATAAACCTATGTAAGAAGGCTCTACTCAATGGTAAGCCAAGTGTCAATAAATTGAGCCAACATCATGAGATTATAGTCTTTGAGAAGCCTGGAAATGATGCATGTGCTGCTTTCATCACTAACAACCACACAAAATCGCCGACAACTATAAATTTCAGAGGTTCAGACTATTATCTGCCACCACGTTCCATAAGCATCCTCCCTGATTGCAAGACTGTGGTCTTCAACACTCAAAATATTGTTTCACAACATACCTCAAGAAACTTCAGGAAGTCCAAGCTTGCAAACCATCATAAGTGGGAGGTGTTTTCCGAGACCATTCCAACTGCCAAGCAATTGCCAACACAGAAAACTTTTCCTGCAGAGCTTTATAGCTTGCTTAAAGACAAAACTGATTATGCATGGTACACCACAAGCGTTGAATTGGGTCCAGAAGATTTGCCAAAGAAGGATGGTATATCCCCAGTGCTTCGTATTCTGAGTCTTGGCCATTCATTGGTTGGCTTTGTAAATGGAGAATGCATTGGATCTAATCATGGTAGCCATGAGGAGAAAGCTTTTGAATTCCAAAAACCTGTGAACTTCAAGGTTGGAGTTAATCAAATATCTATGTTGGCTAGCACAGTGGGACTCCCAGATAGTGGAGCATATATGGAACACAGGTTTGCTGGACCCAAGTCTATGACCATCCTTGGTCTGAACTCTGGAACAATTGATTTGACTCTAAATGGTTGGGGACAGCGGGTTGGTCTTGAAGGTGAGAAGCTTAACATTTTCACTGAGGAGGGATCAAAGAAGGTACAATGGAAGGAGGCCAAGGGACCCGGACCAGCTCTCTCCTGGTACAAGACAAATTTTGCAACCCCGGAAGGCAATGAACCTGTTGCCATCGGGATGACTGGTATGGGAAAAGGAATGATTTGGGTCAATGGCAAAAGCCTTGGTCGCCACTGGATGAGCTATCTCTCCCCTCTTGGAAAGCCTACTCAGTCAGAGTACCACATCCCAAGATCTTTTCTGAATCCAAAGGACAACTTGCTTGTTGTGTTAGAGGAAGAGAAAGCAAGTCCAGAAAATATTGTAATCCTAAATGTCAATAGAGATACAGTTTGCAGTTACATCACAGAGGATCACCCACCAAATGTCAAGTCATGGGAAACTAAGAACATGAAGCTCCGTCCTATAGTTGATAATTTGGCACCAGAAGCTGTACTCAGTTGTCCAAACCGCAAAAGGATTTTGGCTGTGGAATTTGCAAGCTTTGGTGACCCTACAGGCTTCTGTGGAGCCTTTTCTATGGGAAAATGCAATGCACCAGACACCAAACAGATTGTTGAGCAGCAATGCTTGGGAAAAGAAGCATGTTCAGTTCCACTGAACAATCCAAAGTTCACCAATAAAGGTGGTGATGATTGTAAAGCTGTGAAAAAGGCACTTGCTATCCAAGTGGAGTGTGGCTCGCAGACACCTACCATAAGGTGA 2193 0.4364 MVPNRNSKQETVLFSKHVFPSGTTGLPYWLREIPNIIFRSNNEPFKRYMKEFVSTIIDKMKAEKLFASQGGPIILTQIENEYNHVQLAYDLEGDNYVQWAAKMAVSMDTGVPWVMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPAIWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGCLVNYYMYHGGTNFGRTSSAFSTTRYYDEAPLDEFGLPREPKWSHLRDVHRAINLCKKALLNGKPSVNKLSQHHEIIVFEKPGNDACAAFITNNHTKSPTTINFRGSDYYLPPRSISILPDCKTVVFNTQNIVSQHTSRNFRKSKLANHHKWEVFSETIPTAKQLPTQKTFPAELYSLLKDKTDYAWYTTSVELGPEDLPKKDGISPVLRILSLGHSLVGFVNGECIGSNHGSHEEKAFEFQKPVNFKVGVNQISMLASTVGLPDSGAYMEHRFAGPKSMTILGLNSGTIDLTLNGWGQRVGLEGEKLNIFTEEGSKKVQWKEAKGPGPALSWYKTNFATPEGNEPVAIGMTGMGKGMIWVNGKSLGRHWMSYLSPLGKPTQSEYHIPRSFLNPKDNLLVVLEEEKASPENIVILNVNRDTVCSYITEDHPPNVKSWETKNMKLRPIVDNLAPEAVLSCPNRKRILAVEFASFGDPTGFCGAFSMGKCNAPDTKQIVEQQCLGKEACSVPLNNPKFTNKGGDDCKAVKKALAIQVECGSQTPTIR* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3245 730 Gene3D Glycosidases 21 241 - -
Dod03g3245 730 SUPERFAMILY Galactose-binding domain-like 301 461 IPR008979 -
Dod03g3245 730 Gene3D - 485 610 - -
Dod03g3245 730 ProSiteProfiles SUEL-type lectin domain profile. 638 723 IPR000922 GO:0030246
Dod03g3245 730 SUPERFAMILY (Trans)glycosidases 24 241 IPR017853 -
Dod03g3245 730 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 24 718 - -
Dod03g3245 730 Gene3D - 636 727 IPR043159 -
Dod03g3245 730 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 70 82 IPR019801 GO:0004553|GO:0005975
Dod03g3245 730 Pfam Beta-sandwich domain in beta galactosidase 245 317 IPR041392 -
Dod03g3245 730 SUPERFAMILY Galactose-binding domain-like 479 626 IPR008979 -
Dod03g3245 730 Pfam Galactose binding lectin domain 642 722 IPR000922 GO:0030246
Dod03g3245 730 PRINTS Glycosyl hydrolase family 35 signature 514 528 IPR001944 GO:0004553|GO:0005975
Dod03g3245 730 PRINTS Glycosyl hydrolase family 35 signature 186 201 IPR001944 GO:0004553|GO:0005975
Dod03g3245 730 PRINTS Glycosyl hydrolase family 35 signature 205 221 IPR001944 GO:0004553|GO:0005975
Dod03g3245 730 PRINTS Glycosyl hydrolase family 35 signature 68 83 IPR001944 GO:0004553|GO:0005975
Dod03g3245 730 PRINTS Glycosyl hydrolase family 35 signature 149 164 IPR001944 GO:0004553|GO:0005975
Dod03g3245 730 PRINTS Glycosyl hydrolase family 35 signature 541 557 IPR001944 GO:0004553|GO:0005975
Dod03g3245 730 PANTHER BETA-GALACTOSIDASE RELATED 24 718 IPR001944 GO:0004553|GO:0005975
Dod03g3245 730 Pfam Glycosyl hydrolases family 35 25 237 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3245 Dod-Chr3 65118507 65124665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3245 25 723 Glycoside Hydrolase AT2G16730 60.541 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3245 - - gmx:102663614 1174.07