Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3238 ATGGCCATTCAAGCGCAGTTTTATCCTACTAATGATATGTCTCCATTTTTCAACAATGGTTATTGTGCTGGTGAGCTTGTTGAGTCATGTTTCAATTCCCAACAGAAACATCATCAACAACAACAACAATTAGAACATCGTTTGCAACAGTTGTATAATGAGAGCCAGAGGCCTATTGATCCCAATAATGTTCTTGTGTATAATCCAAAAGTCAACAACAATCACCACCCTTCATCAAATTCTCCTGGCTTTGGTTTTCAGTTTGAGATGCAGAGGGAACAGATTGATCAACAGATTGATCAGTGCATCATATTACAGAATGCAAAATTGAGGCATATGATACAAGAGCAAGGAAAGCAACAAGTGGCAGCGTTATTGAGAAAAGTTGAAGCTCGCTCACTTTGCATGCTGAGGGAAAAGGATCAAGAGATTGCGCAGGCTGCAAGGAAAAGGGAGGAGTTGGAAGACTATTTGAGAAGACTAGAGGCAGAGAACCAAGCTTGGCAAAGATTGGCTCAAGAGAACGAGGCCATGGCATTGTCCTTACACAAAACATTGGAAGAGATGAGAGAAAGAGGCTCATATGGGGTGGTGGCAAATGATGCAGAATCATGCTGTGATGAATGGAAAGGAATTGAAGATGAAGAAGAAGAAGAAGAAGGAACAGGGGAAAATGGGGTAGGGGATCAGTTTGAACAGATTACGAGGGAGCTGATGCTTTGTAAGAGCTGTCATTCTAGGAAGTCGTGTTTTTTGTTCCTTCCATGCAGGCACCTTTCCTCATGCAAAGCTTGTGATGCTTTCTTGCAAGCTTGTCCTGTCTGCAGAATGCCAAAGAAGGCTAGTATAGAAACTTTGATTTTCTAG 867 0.4187 MAIQAQFYPTNDMSPFFNNGYCAGELVESCFNSQQKHHQQQQQLEHRLQQLYNESQRPIDPNNVLVYNPKVNNNHHPSSNSPGFGFQFEMQREQIDQQIDQCIILQNAKLRHMIQEQGKQQVAALLRKVEARSLCMLREKDQEIAQAARKREELEDYLRRLEAENQAWQRLAQENEAMALSLHKTLEEMRERGSYGVVANDAESCCDEWKGIEDEEEEEEGTGENGVGDQFEQITRELMLCKSCHSRKSCFLFLPCRHLSSCKACDAFLQACPVCRMPKKASIETLIF* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3238 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 287 IPR013083 -
Dod03g3238 288 ProSiteProfiles Zinc finger RING-type profile. 241 276 IPR001841 -
Dod03g3238 288 SUPERFAMILY RING/U-box 235 280 - -
Dod03g3238 288 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 287 - -
Dod03g3238 288 Pfam Zinc finger, C3HC4 type (RING finger) 239 280 - -
Dod03g3238 288 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 287 IPR017066 -
Dod03g3238 288 Coils Coil 34 54 - -
Dod03g3238 288 Coils Coil 137 178 - -
Dod03g3238 288 PIRSF SBP1_RNase_bind 7 288 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3238 Dod-Chr3 65065587 65067128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3238 K19042 - gmx:100789863 262.692