Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3233 ATGGAACTGAACTTCTGCGTGAACCACCACCACCACCACCCTCACACTCTCAGATTCACCTCCTCCTCTTCCTCTTCCTCTACTTTCTCCCTCTCTACTCTCCGTTGCGTCCGAACGCACTTCCTCGGTTCCTCGCACACTCTCCGTCCACTGCAACAATCTCTTCGGTCCGCCAAGAAATGCAGCAGGAGGTTAGGGCTCCTTCGCCTCCATTCCCCTCGCTTCGTCTTCAAGGCCTCCTTCCATTCCCACTCCGTCGTCGTCGTCGTCATCCTCGTCACTCTTACCGCCGTTTCCTTCCTCCGATTCACTCTCACCAACAGAAATAAGAAGCATCTCAACCAGGCGCGGGGACGTCCAAAATTTGCATTATCACCGCAAGGCAGTAATGTTGGAAACCAGGTCATTGAAAGCCAGATTCTTGGTTTTCAGGAATTTCAAAATGAAATTGGAAATTTGAAGGATCACCACACGGAAGATGACTGTGTTTTAAAGGACAAAGAGGCCCAGCTTTTGAAATCTTCAATGGTTCTGACTACTGTGTCAGAGTCATCCTCTTCCGTTCTTGACTCTAGTGTTAGTAATAGCAGCTCAAAGGTGTTAGAAGACTCTTTTTTGTTGGTGGCTTTTCAATCAAGTTCATTACAACCTATTGCCTTCGCTGAAGAAATGGATTTACAAGTGGAAGAAAATCAAGATCTAGTTGACTCTGATCCTGAGTCGCCTTTGAATATAGTTAAATCTGAGAATGCTGCTTCTTTTGTTGGTGTAAACACAACAACCAATGAACATACTGATGAAAACATTGAACTTGGTGCCATCAGCTTTGATGCCCTTTTTGGGGAATCAGCTAGGCAAGAGCTGTACATGTTTTATGAGGCTAACAAGTCTGCAATTGGATCCATGTCCCCACTGAGTAGTTTAAAGTCATTATCTCCTCATGCTTCTGTTCATAATATAAAAGGATTGCCCTCAGCAGCTGGAAATGCCACACTAAAAGGATCTGAATTATCCACGGATATTTCTCTACAAAGCTCAGAGTATGTTGAAGGACTGGTACCAATTTCAAGTCATAGAGAAGGCTACCCTCCCCAACATGGAAGCAAAAACTTGAGCACAAGCGGCAGATCTCTGAGAGACAGGGAAAGAAACCATCTGAATCATACTAGTAACAAAGTTTTCCCACAGACTGCCCACTCAATCAGGGCATATTTTGATCAGAAAAATGATCACACCAGTGGGCATTTTGACCAGAAAAATGATCACACCAGGGTGCATTTTGATAAGAAAAATGATCAAACCAGGGTGCATGATGATCAGAAAAATGATCATTCAGAGTATCTAAGCAGATATAATTACCTGCTAAAAGCTGGGAGGTTACATGAATGTGTAGAATTGCTTAAAGATATGGAAATGAAGGGTTTATTAGATATGACCAAGATTTATCATGCAAAGTTTTTTAACACCTGCAAGAGAAAAAAGGCGGTTAAAGAAGCTTTTGATTACATTAGGCTGATTCCAAATCCAACGTTGAGTACATTTAATATGCTTATGTCAGTGTGTACAAGCTCCCAAGATTCAGAAGGGGCATTCCAAGTGTTGAAGCTTCTTAAGGATGCTCGACTAGAACCTGATTGCAAACTTTATACAACTCTGATTTCAACTTGTGCTAAGAGCGGAAAAGTCGATAAAATGTTTGAAGTGTTTCACAAGATGGTTAATTCTGGAGTGCAACCTAATGTTCTTACCTATGGAGCACTTATTGATGGCTGTGCTAGAGCTGGGCAAGTAGCTAAAGCATTTGGTGCTTATGGGATAATGAGGTCCAAGAATGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCAAAGTCAGGAGCAGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCAGCTGAAATACAGCCCATTGACCCAGATCACATAACTTTTGGTGCATTGATGAAGGCATGCGCAAATGGTGGTCAGGTTGAACGGGCACGAGAAGTGTATAAGATGTTACAAAAATATAATGTAAAGGGAACCCCAGAGGTTTACACTATTGCCATTAATTCTTGCTGCCAAACTGGAGATTGGGACTTTGCATGTAGTGTTTACAATGACATGACCCAGAAAGGGGTGCTACCTGATGAGATGTTCCTGAGTGCACTAATAGATGTTGCTGGGCATGCTAAAAAGCTGGATGCTGCCTTTGAAGTCCTGCAAGAAGCCCGTAAAGGAGGAATACATATTGGAATAATGACATATAGCTCACTGATGGGTGCCTGTAGCAATGCAAGAAATTGGGAGAAAGCATTGCAACTATATGAATATCTCAAATCTCATAAATTGGTGCAAACAGTTTCAACAGTTAATGCTTTGCTCACTGCACTTTGTGATGGAGATCAATTTCAGAAGGCTTTGGAAGTTTTATCTGAAATGAAAGGATTGGGACTGTGCCCAAACAATATCACATTCTCAATACTTATAGTGGCAAGTGAGAAAAAGGATGATATGGAAGCAGCTCAGATGCTTCTTTCTCAAGCCAAAATGGATGGTGCTGCCCCTAATCTCATCATGGGTCGATGCATAATTGGAATGTGCCTGCGGAGATTTGAGAGGGCTTGCTTTGTTGGTGAACCCGTTTTATCTCTTGATTCAGGACGGCCACAAGTAGATAACAAATGGACATCACTTGCTTTAATGTTGTATCGTGAAACAATTGGAGCTGGTGAAAAGCCTACAAGTGAAATATTGTCACAAATTCTGGGATGTCTGCAACTCCCTTACGATGCATCTATCAAAAATAGACTAGTTGAGAACCTGGGAGTAAGTGTGGATTCTTCAAGAAGCTCAAACCTCCGTTCACTAGTGGATGGTTTTGGTGAATATGATCCTCGTGCTTTTTCAATACTTGAGGAAGCTGCTTCACATGGAGTTGTTCCATCAGTATCATTTAAAGTGAGTCCTATTGTTGTTGATGCTAAAGATATGCATGCTTCTACTGCTGAGGTATACCTGTTAACTGTTTTGAAAGGTCTCAAGCATCGACTAGCAGCAGGTGCAAGATTACCCAATGTAATCATCTTGTTGCCGGCAGAGAAAACAAAAGTTTCATCTTCCAAGGGGGAAAAGATTATTAACTTTGCAGGAAGAGTTGGCCAAGCAGTTGCAGCGTTATTTAGGAGGCTTCAGATTCCTTACCAGGGTAGTGAATCGAATGGGAAGCTTAGAATTAATGGTCAAGCTCTGAAAAAGTGGTTTCAGCCAAAACTCAAATCGCCGTTCAGTGGGAAACCAGGTGGCTGGAGCTCATCCCAATCACGACTGGGCAAAAGCATTAGCCGTCAGCAGCGAAACATTCGAACTGGCAATCTATCTTTGGACTAA 3405 0.4238 MELNFCVNHHHHHPHTLRFTSSSSSSSTFSLSTLRCVRTHFLGSSHTLRPLQQSLRSAKKCSRRLGLLRLHSPRFVFKASFHSHSVVVVVILVTLTAVSFLRFTLTNRNKKHLNQARGRPKFALSPQGSNVGNQVIESQILGFQEFQNEIGNLKDHHTEDDCVLKDKEAQLLKSSMVLTTVSESSSSVLDSSVSNSSSKVLEDSFLLVAFQSSSLQPIAFAEEMDLQVEENQDLVDSDPESPLNIVKSENAASFVGVNTTTNEHTDENIELGAISFDALFGESARQELYMFYEANKSAIGSMSPLSSLKSLSPHASVHNIKGLPSAAGNATLKGSELSTDISLQSSEYVEGLVPISSHREGYPPQHGSKNLSTSGRSLRDRERNHLNHTSNKVFPQTAHSIRAYFDQKNDHTSGHFDQKNDHTRVHFDKKNDQTRVHDDQKNDHSEYLSRYNYLLKAGRLHECVELLKDMEMKGLLDMTKIYHAKFFNTCKRKKAVKEAFDYIRLIPNPTLSTFNMLMSVCTSSQDSEGAFQVLKLLKDARLEPDCKLYTTLISTCAKSGKVDKMFEVFHKMVNSGVQPNVLTYGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALIAACAKSGAVDRAFDVLAEMAAEIQPIDPDHITFGALMKACANGGQVERAREVYKMLQKYNVKGTPEVYTIAINSCCQTGDWDFACSVYNDMTQKGVLPDEMFLSALIDVAGHAKKLDAAFEVLQEARKGGIHIGIMTYSSLMGACSNARNWEKALQLYEYLKSHKLVQTVSTVNALLTALCDGDQFQKALEVLSEMKGLGLCPNNITFSILIVASEKKDDMEAAQMLLSQAKMDGAAPNLIMGRCIIGMCLRRFERACFVGEPVLSLDSGRPQVDNKWTSLALMLYRETIGAGEKPTSEILSQILGCLQLPYDASIKNRLVENLGVSVDSSRSSNLRSLVDGFGEYDPRAFSILEEAASHGVVPSVSFKVSPIVVDAKDMHASTAEVYLLTVLKGLKHRLAAGARLPNVIILLPAEKTKVSSSKGEKIINFAGRVGQAVAALFRRLQIPYQGSESNGKLRINGQALKKWFQPKLKSPFSGKPGGWSSSQSRLGKSISRQQRNIRTGNLSLD* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3233 1134 MobiDBLite consensus disorder prediction 1098 1134 - -
Dod03g3233 1134 Gene3D Tetratricopeptide repeat domain 475 595 IPR011990 GO:0005515
Dod03g3233 1134 Gene3D Tetratricopeptide repeat domain 764 881 IPR011990 GO:0005515
Dod03g3233 1134 TIGRFAM PPR: pentatricopeptide repeat domain 654 685 IPR002885 -
Dod03g3233 1134 TIGRFAM PPR: pentatricopeptide repeat domain 690 723 IPR002885 -
Dod03g3233 1134 TIGRFAM PPR: pentatricopeptide repeat domain 760 790 IPR002885 -
Dod03g3233 1134 TIGRFAM PPR: pentatricopeptide repeat domain 795 827 IPR002885 -
Dod03g3233 1134 TIGRFAM PPR: pentatricopeptide repeat domain 548 581 IPR002885 -
Dod03g3233 1134 TIGRFAM PPR: pentatricopeptide repeat domain 513 546 IPR002885 -
Dod03g3233 1134 TIGRFAM PPR: pentatricopeptide repeat domain 583 615 IPR002885 -
Dod03g3233 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 580 614 IPR002885 -
Dod03g3233 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 652 686 IPR002885 -
Dod03g3233 1134 MobiDBLite consensus disorder prediction 356 379 - -
Dod03g3233 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 687 721 IPR002885 -
Dod03g3233 1134 MobiDBLite consensus disorder prediction 1104 1134 - -
Dod03g3233 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 615 645 IPR002885 -
Dod03g3233 1134 Pfam PPR repeat family 545 593 IPR002885 -
Dod03g3233 1134 Pfam PPR repeat 454 475 IPR002885 -
Dod03g3233 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 510 544 IPR002885 -
Dod03g3233 1134 Gene3D Tetratricopeptide repeat domain 596 756 IPR011990 GO:0005515
Dod03g3233 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Dod03g3233 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 757 791 IPR002885 -
Dod03g3233 1134 Pfam Pentatricopeptide repeat domain 815 873 IPR002885 -
Dod03g3233 1134 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 79 1134 - -
Dod03g3233 1134 Pfam Pentacotripeptide-repeat region of PRORP 660 802 IPR033443 -
Dod03g3233 1134 Pfam PPR repeat 610 642 IPR002885 -
Dod03g3233 1134 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 792 826 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3233 452 876 Glycosyltransferase AT1G05670 24.711 5.43e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3233 - - gmx:100814164 1528.07