Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3219 ATGCTCGGATTGGGCGCCATTCCTTCATTGTTCCTAGCCGTGGCAGTGTTAGCCATGCCCGAGTCACCAAGGTGGCTCGTTTCCCAAGGTCGCTTGGGCGAAGCCACAAAAATTCTCGACAAAATCTCAGACTCCAGACAAGAGGCTCAGCAAAGGCTAGCCGACATCAAAGACACAGCAGGGATTCCCCAAAGCTGCAACGACGACGTCGTTCCAGTAACAAAGCAGAAACAAGGCAAAGGCGTGTGGAAAGAGCTTCTCCTTTATCCAACGCCCGCAGTTCGGCACATCTTCATCGCTTCCTTGGGGATTCACTTCTTCGCACAATCAACAGGCATAGACGCCGTCGTTTTGTACAGCCCAAGAATCTTCGAGAAGGCTGGGATCACCTCCGACACGAACAAGCTCCTTGCAACCGTGGCCGTTGGATTTGTCAAGACGATCTTCATCTTAGTGGCCACGTTTTTGTTGGACCGGGTTGGGCGACGCGTGTTGCTTTTTAGCAGCGTTACTGGGTTGATAATCTCTCTTGTAACCCTTGCGGTGAGTCTAACCGTAGTGGATCATTCACGCACGACGCTTAAATGGGCCATTGGGCTTAGCATAGCCATGGTGTTGTGCTTCGCGGGCTCGTTCTCTATTGGGTCTGGGCCCATTACGTGGGTTTATAGTTCAGAGATATTCCCGTTGAGGCTGCGGGCTCAAGGTGTGGCTATTGGAGCTGTGGTGAATAGGGTCACCAGTGGGGTCATCTCAATGACTTTTCTGTCCCTATCGAAGGCCATTACCATAGGTGGGGCATTCTTTCTCTTCGCTGGGATTGCAGTTGCGGCTTGGATCTTTCACTATACTTTGCTTCCTGAAACGCGAGGCAAAACACTCGAGGAAATTGAAGGGTCCTTTGGTAATTTTTGGTGGAAATCTAACGACACTGCTAGCGGGGTAGTTAACCGTAATAACAACGAAAACGGCCAAATCCAGTTGGGGACCAACTCATACCAGCCTTTGAGAGGTGTGGATTAA 1023 0.5073 MLGLGAIPSLFLAVAVLAMPESPRWLVSQGRLGEATKILDKISDSRQEAQQRLADIKDTAGIPQSCNDDVVPVTKQKQGKGVWKELLLYPTPAVRHIFIASLGIHFFAQSTGIDAVVLYSPRIFEKAGITSDTNKLLATVAVGFVKTIFILVATFLLDRVGRRVLLFSSVTGLIISLVTLAVSLTVVDHSRTTLKWAIGLSIAMVLCFAGSFSIGSGPITWVYSSEIFPLRLRAQGVAIGAVVNRVTSGVISMTFLSLSKAITIGGAFFLFAGIAVAAWIFHYTLLPETRGKTLEEIEGSFGNFWWKSNDTASGVVNRNNNENGQIQLGTNSYQPLRGVD* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3219 340 Coils Coil 39 59 - -
Dod03g3219 340 MobiDBLite consensus disorder prediction 319 340 - -
Dod03g3219 340 MobiDBLite consensus disorder prediction 319 334 - -
Dod03g3219 340 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 1 313 - -
Dod03g3219 340 Pfam Sugar (and other) transporter 1 299 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod03g3219 340 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 313 IPR045262 GO:0015144
Dod03g3219 340 SUPERFAMILY MFS general substrate transporter 2 298 IPR036259 -
Dod03g3219 340 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 290 IPR020846 GO:0022857
Dod03g3219 340 Gene3D MFS general substrate transporter like domains 1 303 IPR036259 -
Dod03g3219 340 PRINTS Sugar transporter signature 225 237 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3219 340 PRINTS Sugar transporter signature 108 118 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g3219 340 PRINTS Sugar transporter signature 202 223 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3219 Dod-Chr3 64796998 64798020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3219 1 331 Organic Solute Cotransporters AT3G18830 59.337 8.29e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3219 - - gmx:100816478 486.493