Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3216 ATGGGGGCTATTGGTGGAGAAGAGCTGTTGAAATGGGAGAAGATGCAAGGACTGAGTGGTCGTGAAGAGAAGATTCTCGTGTTGATAAGGCTCAGGCCTTTAAGTGAGAAGGAAATCTCTGCTAATGAATCAGCTGACTGGGAATGCATCAATGACACTACTATCTTGTACCGGAACACACTGCGGGAGGGTTCCACATTTCCAAGTGCCTACACATTTGACAGAGTATTTCGGGGTGACTGTGCCACAAGGCAGGTTTATGAGGAAGGAGCCAAAGAAATTGCTCTTTCAGTTGTTACCGGAATTAACTCAAGTATTTTTGCATACGGGCAAACAAGTAGTGGAAAGACATACACGATGGTTGGAATTACGGAATATGCTGTGGGAGATATTTTTGACTACATAAAAAGGCATGAAGAAAGAGCATTTGTGTTGAAGATCTCAGCAATTGAGATTTACAATGAAATTGTTAGGGACCTCCTCAGTACTGACAACACTCCACTTAGGCTCCGTGATGATCCGGAGAGAGGACCCATTTTAGAGAAACTTACAGAGGAGACTCTACGGGACTGGGGGCATTTGCAAGAGCTCCTATCTTTCTGTGAAGCTCAGAGACAGGTTGGAGAGACATACCTGAATGAAAAGAGTTCTAGATCTCACCAAATCATCAGATTGACAATAGAAAGTTCTGCCAGGGAATTCTTGGGCAAAGGAAACTCAGCCACTCTATCAGCTAGTGTGAATCTTGTTGATTTGGCAGGGAGTGAGCGTGCATCTCAGCTATCATCAGCTGGAGTGAGATTGAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTGGAACAGTCATTCGTAAGCTTAGTAAGGGGAGAAACGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTCCTTAGGTGGCAATGCTAGAACAGCCATCATTTGCACTCTGAGCCCTGCGCGAAGCCATGTAGAGCAAACCAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTGACCACTAAAGCACAGGTTAATGTAGTAATGTCTGATAAGGCCTTGGTTAAGCAGTTGCAAAAAGAGGTGGCCAGATTGGAGAGTGAGTTGAGAACACCTGGTCCTGCTAATGCCAGTTGTGATTATGCAGCATTGTTGAGAAAGAAAGATCTCCAGATAGAAAAGCTGGAGAAGGAGATCAGGGAACTAAGTAAGCAACGTGATCTTGCTCAATCAAGAGTTGAGGATTTGCTACGCATGGTTGAGGAGGATCAGACATCTAAAAAAGAAGGGGAAGATATATGGGAGGATGACTGTTCAGTATCAGAGTCATCAAGTATAAGTGGTCCTGTTCTTCCAGATATACGAACTAGAAAGTTCAACAATCCTCACTTTAATGCTGGAGACCGTGGAAGTAATCCTGATGAATACCCTGATGAAGACTGCAAAGAAGTTCAATGTGTTGAGGTGGAGGAGTCAAGTAGAGACAACTTAGAATATCCTGATCCATTGCATAGTGATGATGGGGAGTTAGCATTACCAATATCTGGAGAGGAAAATGGAATAAGTGAGGAAATATCTACCCATCTGAATGAAGGACGGGAAGAGAGTCAGATCCAAGACAACTCGTCATATAGTGTGCTTGAGCAGAGGCTTCATGATGTGCAATCAAGCATTAATTCTCTTGTATGCCCTTACCCTGATGAGCAATCTCCACAGGCCACTCCAAGAAATATGTCAAATTTTAGGAACCTTAAATTAAGAAGGAGCTGGAGTTATTCGGAATACCATGTGCCTGGTTCTCCTGAGAGAGCAGGAGAAATAGATAGGACTCCAGCCAATGGGTTTGAAAAAGGATTCCCTGGAAGACCACATAGTTTGCGGAGAAAGTTCCCTCCATTAGATTTTAGTGGTTCCACTAGATTGTCAAGGAACGGTTCTCGGTCTTCTATTGGAAGCCCTTCTGTCGATGAGTTTGGAGCCAACAGCATGAGAACATCTGCTGATGAAGATATTACCAGCATCCAAACTTTTGTTGCTGGGATGAAGGAAATGGTGAAACTTGAGTATGAGAAGCATCTTGTTGATGGTCAGAATCAAGAGTCAGGAGGAATACCTTTCAAGTTTGAGAAGAATGTGAAAGATGTAGGTGTGGATCCAATGTTGGAGCCACCTGGAACTCCTTTAGATTGGTCTCTGCAATTCAAGAGGCAGCAAAAAGAGATAATTGAACTGTGGCAGTCTTGCTGTGTACCATTGACACACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCGAACAGACTCCATCTACATGGAGGTGGAGCTTCGAAGACTAACTTTCCTCAAAGAAACATTTTCTGATTCAAGCCATGCTGTTAAGGATGGTCAAACAATCACACTAGCTTCAAGTGTGAAGGCTCTTCGCCGAGAGAGAGAAATGCTGGTGAGGCTCATGCAGAAAAGGCTTTCTGCGGAAGAGAGGAATAGGCTCTTCAAGGAGTGGGGCATTGCATTGGATTCAAAGCGCAGGAGGATGCAGCTAGCGAGCCGTTTGTGGAGCAACACTGACATGAGCCACGTAATGGAGAGTGCCACGATAGTTGCAAAGTTAGTGAGGTTTTCAGAGCAAGGAAAGGCCCTTAAGGAGATGTTTGGGCTCAGCTTCACGCCCCAACACACACGCCGGAGATCATCTTATTCATGGAAAAACAGCAGCAGAGCATCATCTCTTTTACTATAG 2763 0.4408 MGAIGGEELLKWEKMQGLSGREEKILVLIRLRPLSEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCATRQVYEEGAKEIALSVVTGINSSIFAYGQTSSGKTYTMVGITEYAVGDIFDYIKRHEERAFVLKISAIEIYNEIVRDLLSTDNTPLRLRDDPERGPILEKLTEETLRDWGHLQELLSFCEAQRQVGETYLNEKSSRSHQIIRLTIESSAREFLGKGNSATLSASVNLVDLAGSERASQLSSAGVRLKEGCHINRSLLTLGTVIRKLSKGRNGHINYRDSKLTRILQPSLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKEVARLESELRTPGPANASCDYAALLRKKDLQIEKLEKEIRELSKQRDLAQSRVEDLLRMVEEDQTSKKEGEDIWEDDCSVSESSSISGPVLPDIRTRKFNNPHFNAGDRGSNPDEYPDEDCKEVQCVEVEESSRDNLEYPDPLHSDDGELALPISGEENGISEEISTHLNEGREESQIQDNSSYSVLEQRLHDVQSSINSLVCPYPDEQSPQATPRNMSNFRNLKLRRSWSYSEYHVPGSPERAGEIDRTPANGFEKGFPGRPHSLRRKFPPLDFSGSTRLSRNGSRSSIGSPSVDEFGANSMRTSADEDITSIQTFVAGMKEMVKLEYEKHLVDGQNQESGGIPFKFEKNVKDVGVDPMLEPPGTPLDWSLQFKRQQKEIIELWQSCCVPLTHRTYFFLLFRGDRTDSIYMEVELRRLTFLKETFSDSSHAVKDGQTITLASSVKALRREREMLVRLMQKRLSAEERNRLFKEWGIALDSKRRRMQLASRLWSNTDMSHVMESATIVAKLVRFSEQGKALKEMFGLSFTPQHTRRRSSYSWKNSSRASSLLL* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3216 920 MobiDBLite consensus disorder prediction 604 665 - -
Dod03g3216 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 378 IPR027417 -
Dod03g3216 920 MobiDBLite consensus disorder prediction 429 486 - -
Dod03g3216 920 Coils Coil 355 375 - -
Dod03g3216 920 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod03g3216 920 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod03g3216 920 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod03g3216 920 CDD KISc_CENP_E 24 346 - -
Dod03g3216 920 Coils Coil 392 426 - -
Dod03g3216 920 MobiDBLite consensus disorder prediction 644 665 - -
Dod03g3216 920 PANTHER CENTROMERE PROTEIN E 6 914 - -
Dod03g3216 920 Coils Coil 815 835 - -
Dod03g3216 920 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dod03g3216 920 Gene3D Kinesin motor domain 17 377 IPR036961 -
Dod03g3216 920 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 914 - -
Dod03g3216 920 Pfam Domain of unknown function (DUF3490) 740 899 IPR021881 -
Dod03g3216 920 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod03g3216 920 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod03g3216 920 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dod03g3216 920 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3216 Dod-Chr3 64772148 64780299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3216 22 427 Miscellaneous Gene Families AT5G06670 39.563 4.60e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3216 K11498 - gmx:100820012 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3216 03 64772148 64780299 Dod03g3216 03 64772148 64780299 ECH
Dod03g3216 03 64772148 64780299 Dod02g0491 02 6416462 6424192 ECH