Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3213 ATGGCCTCAGCATCAGCAACTCTTCTCAAGCCATCATCCCCAGTTCTTGACAAGTCTGAGTGGGTGAAGGGTCAAACCCTCCGCCAAACTTCTGTTTCTGTTGCAAGGAGCAACCCCACCACCACCCCCTCTGCACTCACCATCAGAGCTGGCTCCTATGCTGATGAGCTTGTTAAGACCGCGAAAACAGTTGCTTCACCAGGCCGTGGTATTTTGGCCATGGATGAATCTAATGCTACCTGCGGGAAGCGCTTGGCCTCAATTGGGCTAGAGAACACCGAGGCTAACCGCCAGGCGTACAGAACCCTCCTTGTGACAGCACCAGGACTTGGTCAGTACATCTCCGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCCACAACCGATGGCAAGAAGATTGTTGATGTACTTATTGAGCAGAAAATTGTTCCCGGAATCAAAGTCGACAAGGGTCTGGTGCCCTTGGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTTTGGATGGTCTAGCATCTCGCTCAGCTGCATACTACCAGCAAGGGGCCCGTTTTGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCAGTCAAGGAAGCAGCCTGGGGTCTGGCTCGATACGCTGCCATTTCTCAGGACAATGGATTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGACCATGGCATTGATAGGACTTTCGAAGTAGCCAAAAAGGTCTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAACGTCCTCTTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACCCCCGGCGCCGAGTGCAAGGACAGAGCCCCTCCTAAGCAGGTTGCTGAGTACACACTCAAGCTCCTTCACACCAGAATTCCACCTGCTGTCCCTGGAATTATGTTCTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAACGCAATGAACCAATCTCCAAACCCATGGCATGTGTCATTCTCATATGCCAGAGCACTACAAAACACCTGCCTGAAGACATGGGGAGGCCGCCCTGAGAATGTGAAGGCTGCGCAAGATGCACTCCTCTTCCGCGCCAAGTCTAACTCGCTTGCTCAGCTCGGAAAGTACACCGGTGAGGGCGAATCTGAGGAAGCCAAGAAGGAGTTGTTCGTCAAGGGCTACTCCTACTAA 1203 0.5212 MASASATLLKPSSPVLDKSEWVKGQTLRQTSVSVARSNPTTTPSALTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKIVDVLIEQKIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVLFEGILLKPSMVTPGAECKDRAPPKQVAEYTLKLLHTRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTGEGESEEAKKELFVKGYSY* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3213 400 Pfam Fructose-bisphosphate aldolase class-I 56 400 IPR000741 GO:0004332|GO:0006096
Dod03g3213 400 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 261 271 IPR029768 -
Dod03g3213 400 Gene3D Aldolase class I 38 399 IPR013785 -
Dod03g3213 400 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 39 400 IPR000741 GO:0004332|GO:0006096
Dod03g3213 400 CDD FBP_aldolase_I_a 54 380 - -
Dod03g3213 400 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 39 400 - -
Dod03g3213 400 SUPERFAMILY Aldolase 47 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3213 Dod-Chr3 64738476 64742021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3213 53 400 Miscellaneous Gene Families AT3G52930 55.682 3.98e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3213 K01623 - gmx:100818383 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3213 03 64738476 64742021 Dod03g3213 03 64738476 64742021 ECH