Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3205 ATGGCACTCAAACTACTCTCACTGCATCTACCTCGCAATCTTCACACTCCTCCTCCCCTCCAAAGCCCAAACCCCATATCACCTTCAACATTCTCAACTCGTCATCACTTACGGCTTCTCAACAAAGCTGCTTTTCCTTCTAGAACATTCCTCGCGTCGTCGATACGACGTCGCATTGGGTTCGCAACGGCTCGCGTGGCTCAGGGACAAGAGCTAAGTGATGGTTCCGAAGAAGGAGCAGAACAGATCGGAGAGGGGCAGACAAAGGAGCTTGCGGAGCAGAGTATATGGAGCCAGGTGAAGGAGATTGTCATGTTTACTGGGCCCGCAACTGGGCTTTGGTTATGTGGGCCCCTCATGAGCCTCATGGACACTGCTGTTATTGGTCAGGGAAGCTCAATTGAGCTTGCTGCTTTAGGTCCTGCTACGGTTGTGTGTGATTACATGAGCTACGCGTTCATGTTTCTCTCTGTTGCTACATCTAATATGGTTGCTACTGCCCTTGCTAAACAGGACAGAGAAGAAGTGCAACAACACATATCTGTATTGCTTTTTGTTGGGTTAGCGTGTGGCTTCATGATGCTTTTGTTCACAAGGCTATTTGGTGCAGCAACACTAACTGCTTTTACTGGGCCAAAGAATGCACATGTAGTGCCAGCAGCTAACACTTATGTCCAGATTCGAGGCTTGGCATGGCCTCCTATACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTCGGCATGAAAGACCCCTGGGGACCCTTGAAGGCTTTGGCTGCTGCTAGCATTATAAATGGCGTTGGTGATATACTTTTATGCACCTATTTAGGCTATGGTATTGCAGGGGCTGCATGGGCTACAATGGCATCACAGGTTGTTGCTGCTTATATGATGATTCAAACTCTAAACAAGAAGGGATACAATGCATTTGCCTTCTCAATTCCTTCAGGGAAGGAACTTCTGATGATACTTGGGCTTGCTGGTCCTGTATTTGTGACAATGATGTCAAAGGTGGTTTTCTACTCGCTACTTATATATTTTGCTACTGCAATGGGAACACACACAGTGGCTGCTCATCAGGTCCTGATCCAAACCTTTTGCATGTTTTCAGTTTGGGGTGAGCCTCTATCCCAAACTGCCCAATCATTTATGCCTGAATTGATATTTGGAGTAAATCGGAGTTTGCCAAAGGCCCGGTTACTTCTAAGGTCTCTTGTGATAATTGGAGCTATAGTTGGATCATTGCTAGGGATTGTTGGAACATCTGTTCCATGGTTATTCCCCTACATTTTTACACCTGATCGGATGGTCATCCAGGAGATGCGTAGGGTGCTGATTCCATACTTTGTAGCACTGGCTGTGACACCCCCTACACACAGCCTTGAGGGAACATTGATGGCTGGACGGGATCTAAAATTTATAAGTTTCTCAATGAGTGGATGCCTTTGTCTTGGTTCGCTTTTATTGATGATCTTGAGTAGCAGATATGGTTTGCAAGGTTGTTGGCTTGCCCTTGCTGGATTTCAATGGGCTCGCTTTTCAATGGCCCTCCAGCGCCTTCTTTCTCCCAATGGCATTTTATACTCGGAAAATCTAGATAAGCAGCAAAAGCTAAGTACAGCTTAG 1626 0.4649 MALKLLSLHLPRNLHTPPPLQSPNPISPSTFSTRHHLRLLNKAAFPSRTFLASSIRRRIGFATARVAQGQELSDGSEEGAEQIGEGQTKELAEQSIWSQVKEIVMFTGPATGLWLCGPLMSLMDTAVIGQGSSIELAALGPATVVCDYMSYAFMFLSVATSNMVATALAKQDREEVQQHISVLLFVGLACGFMMLLFTRLFGAATLTAFTGPKNAHVVPAANTYVQIRGLAWPPILVGWVAQSASLGMKDPWGPLKALAAASIINGVGDILLCTYLGYGIAGAAWATMASQVVAAYMMIQTLNKKGYNAFAFSIPSGKELLMILGLAGPVFVTMMSKVVFYSLLIYFATAMGTHTVAAHQVLIQTFCMFSVWGEPLSQTAQSFMPELIFGVNRSLPKARLLLRSLVIIGAIVGSLLGIVGTSVPWLFPYIFTPDRMVIQEMRRVLIPYFVALAVTPPTHSLEGTLMAGRDLKFISFSMSGCLCLGSLLLMILSSRYGLQGCWLALAGFQWARFSMALQRLLSPNGILYSENLDKQQKLSTA* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3205 541 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 36 532 IPR044644 -
Dod03g3205 541 TIGRFAM matE: MATE efflux family protein 115 502 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod03g3205 541 Pfam MatE 118 268 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod03g3205 541 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 36 532 - -
Dod03g3205 541 CDD MATE_DinF_like 101 513 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3205 Dod-Chr3 64626532 64647742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3205 K03327 - gmx:100778835 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3205 03 64626532 64647742 Dod03g3205 03 64626532 64647742 ECH