Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3203 ATGACTCCTCAAGCGCGTCTCAACCCAGAAGCCCCCTCATTCATCCCTAACCAACACCACAAGCTGCTGCCGCAACCAATCCCGGCCCATTGTTTCTCTCCGCATCACTATTTCTCGCGAGTTCACAGCACTCTACTCCAAACTTATATCCCCACCTTAACGCCACCTCCACTAACCTCTACTACTTCCTTTGATCATGATAGCACCACCACCACCAACACTGGCACCACTCTTTTACCACCCTCTGAGCCCGAACCAACAACTTGTTCAGAGAAGCAACAGCAGAAAGAGGAAGTGTTGGTGGTGGGGTTTGAAAACGAAGGTTGTTCAAAAGGGTTTGCTGTTGCACAGAATAAGAAGCATGTTTCCAAGGGGATCAAAGGTAATGGAAGAATAATGAACGGTAGTGATGGTGGGTTGATGAGACCAGTACGGCGTTTTGCTTGGAGGAAGAAGGGAGCTACAGCTGATGATGAAGAGCGACAGAAATATTACTGTCAACATTTTAGGACCCTGCAATTTTTTCGGCGCGAGGAACAGAGCTCTGATGCTTTCCCTAAGAAGACACGAGGTTTTCCAGTCCTACCAGTCCGAGAGGACGGAGAAGACACGACAGTGATGATAAAAAACATTCCTGCCAAATACTCCCGAGATAAGCTGGTGGAGTTTTTGGACAACCACTGCATGGTGGAGAATAGTAAAGAAGAGGGGAAGAATGGCGACGAGCGCATTTTCTTGGCTTTTGATTTTGTTTATCTGCCGATTGATTTTAGAAGCGGACTAAACAAAGGATACGCATTTGTCAATTTTACCAGCCCGGAAGCGGCATGGAAGTTCAATTTGACTGCCTCGAATAGGAAATGGGACTTGTTCCAGTCCCACAAGATACGCGAAGTAGTTGCTGCACGCCTCCAGGGAAAAGAGAAATTGCAGACGCACTTCGAAACTATGCACTTTCCCTGCGAATACGAGGAAGTTCTGCCAGTGTTCTATAGCCCTCCTAGGGATGGTGTGATCAAAGGAGAGCCGAGGACAGTGGGGAGGCTTATCAGGCGTCGCCAGCTTTAA 1068 0.4803 MTPQARLNPEAPSFIPNQHHKLLPQPIPAHCFSPHHYFSRVHSTLLQTYIPTLTPPPLTSTTSFDHDSTTTTNTGTTLLPPSEPEPTTCSEKQQQKEEVLVVGFENEGCSKGFAVAQNKKHVSKGIKGNGRIMNGSDGGLMRPVRRFAWRKKGATADDEERQKYYCQHFRTLQFFRREEQSSDAFPKKTRGFPVLPVREDGEDTTVMIKNIPAKYSRDKLVEFLDNHCMVENSKEEGKNGDERIFLAFDFVYLPIDFRSGLNKGYAFVNFTSPEAAWKFNLTASNRKWDLFQSHKIREVVAARLQGKEKLQTHFETMHFPCEYEEVLPVFYSPPRDGVIKGEPRTVGRLIRRRQL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3203 355 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 1 7 341 - -
Dod03g3203 355 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 204 276 IPR000504 GO:0003723
Dod03g3203 355 MobiDBLite consensus disorder prediction 57 92 - -
Dod03g3203 355 SUPERFAMILY RNA-binding domain, RBD 198 283 IPR035979 GO:0003676
Dod03g3203 355 Gene3D - 146 306 IPR012677 -
Dod03g3203 355 PANTHER RNA BINDING PROTEIN 7 341 - -
Dod03g3203 355 Pfam RNA recognition motif 2 204 314 IPR007201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3203 Dod-Chr3 64618764 64620799 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3203 - - vun:114170421 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3203 03 64618764 64620799 Dod03g3203 03 64618764 64620799 ECH