Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3185 ATGCTTGTGCTGTTTGAAACCCCTGCGGGCTTTGCCCTCTTTAAGGTTCTTGACGAAGGCAAGCTTTCTAAAGTTGAGGACTTATGGAAAGAGTTTTCCAGTGTAGACACTGCTAGAAAGGTGGTCAAGTTGAAGGCTTTTTCTAAGTTTGAGAATACTTCGGAGGCTCTGGAGGCGGCGACTTTGTTGATTGATGGAAAAGCTAGCAAGGGTCTGCGCAAGTTCCTCCGTGCTCATTGTGAAAATGAAACTCTGGCCGTGGCTGATTCAAAGCTTGGGAATGTGATTAAGGAGAAATTGAAAATTGATTGTGTTCACAACAATGCTGTTATGGAGTTGATGAGAGGTGTTAGAAATCAGTTAAATGAACTCATATCTGGTCTAGCTGTCCAAGACATGGCCCCTATGAGCCTGGGTCTATCTCATAGCTTATCCAGATACAAGCTTAAGTTCAGTGCTGAGAAGGTGGATACCATGATTGTCCAGGCTATTGGTTTACTTGATGATCTTGATAAAGAGTTGAATACATATGCCATGAGGGTTCGAGAATGGTATGGCTGGCATTTTCCAGAGCTTACTAAAATAATACAGGATAACATCCTTTATGCAAGGGCAGTCAAGTTGATGGGTGATCGTGCTAATGCTGCAAATCTTGATTTCTCTGAGATTTTGCCAGAGGAAGTTGAGGCAGAACTGAAGGAGGCGGCTGTGATATCTATGGGAACTGAAATTGGTGAGCTTGATTTGGCAAATATAAGAGAACTATGTGACCAGGTTTTGTCTCTTTCAGAGTACAGAGCACAACTCTATGATTATCTGAAAAGTAGGATGAACACAATTGCTCCCAATTTGACTGCTCTTGTTGGGGAGCTTGTTGGTGCTCGCCTCATCGCCCATGGAGGTAGCTTATTAAATCTGGCAAAGCAGCCTGGTAGCACTGTCCAGATACTTGGTGCTGAGAAGGCTCTATTTCGGGCACTGAAGACTAAGCATGCTACTCCCAAGTACGGTCTTATTTATCATGCATCCTTGATTGGTCAGGCAGCTCCCAAGTTCAAGGGGAAAATTTCTCGGTCACTTGCTGCAAAGACAGCATTGGCTATCAGGTGTGATGCTCTTGGAGATGGCCAAGATAACACTATGGGATTGGAGAACAGAGCCAAGCTTGAAGCACGATTGAGAAACCTCGAAGGCAAAGAATTAGGTCGTTTTGCTGGTTCTGCTAAAGGGAAACCCAAGATAGAAGCATATGACAAGGATCGAAAGAAAGGAGCTGGAGGACTAATAACCCCGGCTAAGACATACAATCCTTCGGCTGATTCAGTTATTGGGCAAGTGGCTAATTCTGCTATGGATGAAGATACCCAACTGCCTTCTGTCACTGATAAAAAGAAAGAGAAGAAAGAGAAGAAGAAAAAGAAGGATGAGAAAAATGAAGAGGATGCAACTTTGCCAGTTGATGGTTTTGCAGCTGAGGAACCAGAAAATGAAGTTGTGAAGAAGGAAAAGAAGAAAAAAAGAAAGGATTCTGCTGAGAATGCTGAGCTGCAGAATGGAGACAAAGATTTAGATGCAGCAGAAAAGAAGAAAAAGAGGAAAAAAACATGCTGA 1611 0.4314 MLVLFETPAGFALFKVLDEGKLSKVEDLWKEFSSVDTARKVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRAHCENETLAVADSKLGNVIKEKLKIDCVHNNAVMELMRGVRNQLNELISGLAVQDMAPMSLGLSHSLSRYKLKFSAEKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNILYARAVKLMGDRANAANLDFSEILPEEVEAELKEAAVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNPSADSVIGQVANSAMDEDTQLPSVTDKKKEKKEKKKKKDEKNEEDATLPVDGFAAEEPENEVVKKEKKKKRKDSAENAELQNGDKDLDAAEKKKKRKKTC* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3185 536 Coils Coil 460 483 - -
Dod03g3185 536 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Dod03g3185 536 Gene3D - 129 284 - -
Dod03g3185 536 MobiDBLite consensus disorder prediction 449 536 - -
Dod03g3185 536 SUPERFAMILY Nop domain 153 397 IPR036070 -
Dod03g3185 536 PANTHER PROTEIN NOP56, PUTATIVE-RELATED 1 534 - -
Dod03g3185 536 SMART NOSIC_2 159 211 IPR012976 -
Dod03g3185 536 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Dod03g3185 536 Gene3D Nop domain 285 397 IPR042239 -
Dod03g3185 536 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 534 IPR045056 GO:0030515|GO:0031428|GO:0032040
Dod03g3185 536 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Dod03g3185 536 MobiDBLite consensus disorder prediction 493 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3185 Dod-Chr3 64446446 64450095 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3185 K14565 - gmx:100775301 881.322