Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3178 ATGGCTAGTGATTCTCCTTTAATCTCCAATGGGAATGGCAATGGCAATGTCAACTCACAGCCTGACCCGCCGCTGCGGAGGACTTACCAAGCAGTAGTGGTTGCAACCCGAGATATGGGCATTTCTAAAGATGGGAAATTGCCCTGGAACTTACCTACTGATCTCAAGTTTTTTGATGAGATCACTACTATGACATCTGATCCAGGGAAGAAAAATGCCATTGTAATGGGTAGAAAAACATGGGAGAGTATCCCCCTTGAGAAAAAGCCTCTCCCTGCTCGCCTTAATGTTGTTCTGACTCGCTCTGGTAGCTTCGATATTGCAACAGCAGAGAATGTTGTTATATGTGGAAGTGTGTCTTCTGCTATGGAACTGTTGGCTGAAACTCCTTACTGTCTTTCAATTGAGAAAGTATTTCTGATTGGAGGTGGTGAGCTATTTAGGGAGGCTCTTAATGCACCTGGATGCGAAGCTGCCCACATTACAGAAATTGAGGAAAGCACTGAGTGTGACACTTTTATGCCTCGAATTGATACCTTGGTATTTCAGCCATGGTACTCATCTTTTCCTTTGGTGGAAGACAACCTCCGCTATTCTTTCACCACTTATGTGCGTGTAAGGAGCTCCGCAGCAGAGTCCCTGAGTCACAATACTGATCCAGTTTTTGATACTAATTCAGACACTGAAAAGTTCGAGGTCCAGAAATTTTCTTTTCTTCCTAAAATGATTTTTGAAAGACATGAGGAGTACAAGTATCTTAGGTTGGTTCAAGAAATCATTACTGAAGGTACAAATAAGGATGATAGGACAGGGACGGGTACCTTGTCGAAATTTGGTTGCCAGGTAACAATTTTGATAGGTTTGTTGAGGGGTTTACTGTGA 882 0.4297 MASDSPLISNGNGNGNVNSQPDPPLRRTYQAVVVATRDMGISKDGKLPWNLPTDLKFFDEITTMTSDPGKKNAIVMGRKTWESIPLEKKPLPARLNVVLTRSGSFDIATAENVVICGSVSSAMELLAETPYCLSIEKVFLIGGGELFREALNAPGCEAAHITEIEESTECDTFMPRIDTLVFQPWYSSFPLVEDNLRYSFTTYVRVRSSAAESLSHNTDPVFDTNSDTEKFEVQKFSFLPKMIFERHEEYKYLRLVQEIITEGTNKDDRTGTGTLSKFGCQVTILIGLLRGLL* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3178 293 MobiDBLite consensus disorder prediction 1 25 - -
Dod03g3178 293 Pfam Dihydrofolate reductase 31 205 IPR001796 GO:0004146|GO:0046654
Dod03g3178 293 SUPERFAMILY Dihydrofolate reductase-like 26 205 IPR024072 -
Dod03g3178 293 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 28 205 IPR001796 GO:0004146|GO:0046654
Dod03g3178 293 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 229 283 IPR036926 -
Dod03g3178 293 CDD DHFR 31 204 IPR001796 GO:0004146|GO:0046654
Dod03g3178 293 PANTHER BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 1 283 - -
Dod03g3178 293 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 237 286 IPR036926 -
Dod03g3178 293 PRINTS Dihydrofolate reductase signature 40 50 - -
Dod03g3178 293 PRINTS Dihydrofolate reductase signature 54 62 - -
Dod03g3178 293 PRINTS Dihydrofolate reductase signature 137 151 - -
Dod03g3178 293 PRINTS Dihydrofolate reductase signature 74 85 - -
Dod03g3178 293 Gene3D Dihydrofolate Reductase, subunit A 15 207 IPR024072 -
Dod03g3178 293 PANTHER THYMIDYLATE SYNTHASE 1 1 283 IPR045097 GO:0016741
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3178 Dod-Chr3 64366956 64368158 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3178 K13998 - gmx:100786311 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3178 03 64366956 64368158 Dod03g3178 03 64366956 64368158 ECH