Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3177 ATGAGGTTCAATCTGCGCCAAAGTTTTCCTCTTCTAACAACTAAGAAAGTATTTTGGCGAGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGCTCAACGAGTGCCAAGGTGCTGCAAGAAAAAGGTATTCATATATGGGATGGCAATGCATCCAGAGAATACCTTGATAGCATTGGTTTGACAGACCGGGAGGAGGGTGACTTAGGACCTATTTATGGGTTTCAGTGGAGGCACTTTGGTGCCAGGTATACTGATATGCATAGTGACTACTCCGGCCAAGGATTTGATCAGCTTTCAGATGTTATTAACAAGATAAAGCATAATCCTGATGATCGACGGATCATTCTCTCAGCGTGGAATCCAGCTGATCTTAAATTAATGGCTCTTCCACCCTGCCACATGTTTGCGCAGTTCTATGTAGCAAATGGGGAGCTCTCATGTCAAATGTATCAGCGATCTGCCGACATGGGCCTGGGTGTACCATTTAATATTGCATCTTACGCGCTCCTGACATGCATGATTGCTCATGTTTGTGATCTTGTTCCGGGTGATTTTGTCCATGTTATTGGTGATGCACATGTTTACCGCAATCATGTGAGGCCATTGCAGGAGCAGCTCCAGAACCTTCCTAAGCCTTTTCCGATTTTGAAGATAAATCCAAAGAAGAAGGATATAGATTCTTTTGTTGCTGCTGACTTCAAGCTCATAGGCTATGATCCTCACCAGAAGATAGAAATGAAGATGGCTGTTTAG 756 0.4378 MRFNLRQSFPLLTTKKVFWRGVVEELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLTDREEGDLGPIYGFQWRHFGARYTDMHSDYSGQGFDQLSDVINKIKHNPDDRRIILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFVHVIGDAHVYRNHVRPLQEQLQNLPKPFPILKINPKKKDIDSFVAADFKLIGYDPHQKIEMKMAV* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3177 251 ProSitePatterns Thymidylate synthase active site. 113 141 IPR020940 GO:0004799|GO:0006231
Dod03g3177 251 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 1 251 IPR036926 -
Dod03g3177 251 PANTHER BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 1 251 - -
Dod03g3177 251 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 1 251 IPR036926 -
Dod03g3177 251 PRINTS Thymidylate synthase family signature 128 143 IPR000398 GO:0004799|GO:0006231
Dod03g3177 251 PRINTS Thymidylate synthase family signature 102 121 IPR000398 GO:0004799|GO:0006231
Dod03g3177 251 PRINTS Thymidylate synthase family signature 146 172 IPR000398 GO:0004799|GO:0006231
Dod03g3177 251 PRINTS Thymidylate synthase family signature 184 201 IPR000398 GO:0004799|GO:0006231
Dod03g3177 251 PRINTS Thymidylate synthase family signature 9 30 IPR000398 GO:0004799|GO:0006231
Dod03g3177 251 Pfam Thymidylate synthase 1 251 IPR023451 -
Dod03g3177 251 TIGRFAM thym_sym: thymidylate synthase 64 251 IPR000398 GO:0004799|GO:0006231
Dod03g3177 251 PANTHER THYMIDYLATE SYNTHASE 1 1 251 IPR045097 GO:0016741
Dod03g3177 251 CDD TS_Pyrimidine_HMase 1 204 IPR023451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3177 Dod-Chr3 64363234 64366920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3177 K13998 - gmx:100786311 508.449