Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3157 ATGGAAGGAACTGGAGGCAGCAGTGCCTCTGCTGCTGCTCAACCACCCGTGAACCAATGGTGGCAGGAATTTTCAAAGATGTTTCAGTATTACCTTGATAAATCTACCCCACACGCCACGTATAGGTGGATTGGGACTTGTGTTATAGCTTCAATCTATGTTTTGAGGGTTTTGTATGTCCAGGGATTTTACATTGTGTCTTATGGTTTGGGAATATACCTGCTGAATCTTTTGATTGGGTTCCTCTCACCTTTGGTTGATCCTGAGCTGGAACCTAATTCCGATGGACCTTTGCTGCCAACTAAAGGCTCCGACGAGTTCAAACCCTTCATTCGCCGGCTTCCCGAGTTTAAGTTCTGGTATTCTTTCACGAAGGCCTTTTTAATAGCATTCTTCATGACTTTCTTTTCTGTATTTGATGTTCCTGTCTTCTGGCCTATATTACTCTGTTACTGGATTGTTCTCTTTGTCCTAACAATGAGGCGTCAAATTGCACACATGATCAAATACAAATATATTCCGCTCAACATTGGAAAGCAGAAGTATACAGGGAAGAAATCTTCTGCAAGGGGCAGTGGCAGTCGCGCAGACTGA 594 0.436 MEGTGGSSASAAAQPPVNQWWQEFSKMFQYYLDKSTPHATYRWIGTCVIASIYVLRVLYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPNSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFLIAFFMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPLNIGKQKYTGKKSSARGSGSRAD* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3157 197 PIRSF AtER_Rer1p 2 193 IPR004932 GO:0016021
Dod03g3157 197 Pfam Rer1 family 20 183 IPR004932 GO:0016021
Dod03g3157 197 PANTHER PROTEIN RER1 1 192 IPR004932 GO:0016021
Dod03g3157 197 PANTHER PROTEIN RER1A 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3157 Dod-Chr3 64205616 64209271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3157 1 197 Miscellaneous Gene Families AT2G21600 76.263 3.35e-105 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3157 - - mnt:21401534 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3157 03 64205616 64209271 Dod03g3157 03 64205616 64209271 ECH
Dod03g3157 03 64205616 64209271 Dod02g0742 02 9610095 9612536 ECH