Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3156 ATGGGGAAAGCGAAGGGGAAGCACCGTTTGGACAAGTACTACCACCTGGCCAAAGAGCACGGTTACAGGTCACGTGCCTCATGGAAGCTCGTCCAGCTCAACTCCAAGTTCCGCTTCCTCGAGTCCGCCACCGCCGTCCTCGACCTCTGCGCCGCCCCCGGCGGCTGGATGCAGGTCGCCGTCCAGCGCCTCCCCGTCGGCCACCTTGTCCTCGGCGTCGACCTCGCCCCCATCGCCCCCATCCGCGGCGCCATCGCCATCCAGGAGGACATCACGCGCCCCGAGTGCAGGACGCGCGTCAAGAAGATCATGGACGAGCACCGCTGCGCCGCCTTCGACGTCATCCTCCACGACGGTTCCCCCAACATCGGCGGCGCGTGGGCTCAGGAGGCCATGAGCCAGAACGCACTCGTCATCGACTCCGTTAAGCTCGCCACTCAATTGTTGGCGCCCAAGGGCATTTTCGTGACCAAGGTTTTTAGGTCACAGGATTACAGTTCTGTGGTGTATTGCTTGAAGCAGTTGTTTGAGAAAGTTGAAGTGGATAAGCCCGCAGCGAGTCGTTCTGAGTCTGCTGAGATTTATGTTGTGGGGCTGAGGTACAAGGCACCTGCTAAGATTGATCCGCGGCTTCTTGATGTTAAGCATCTCTTTCAGGGGTCTGGGGAACCGCAGGCTAAGGTGATAGATGTACTTCGAGATAATAAGCAAAAGCGGCATCGCGATGGTTATGAAGATGGAGTCTCAACTTTAAGGAAGGAATCTTCTGCTTCCAATTTCATCTGGTCAGATGCTCCTCTGGATATCCTTGGTTCAGTGACTTCCATAACCTTTACTGATCCAGCTGATCTACCAATCAAGGATCATGAATTAACAACTGAAGAGGTGAAATCTCTGTGTGATGATTTGAGGGTTTTGGGGAAGCAAGACTTCAAGCATCTTCTAAAGTGGCGGATTCACATCAGAAAAGCTCTTTCATCTGCTGAAAAGCCTGATCCCTCTACTAAAGCAGAAACAGAGAAGGAGCCTGAGGTGGATGAAGAAGATAGAATACTCAATGAAATGGAGGAGCTGACTCATACAATGGAACGCAAAAAGAAACGTGCAAAGAAGCTTCTTGCAAAAAGAAAGGCTAAGGAAAAGGCACGGAAAGCTACGGGGATGCAAATAGATGCAATAGAAGATGGTTATGTTGATCAGGAGTTGTTTTCTCTTTCCTCTATCAAGGGTAAGAAGGATCTGGTTGCTGTTGACACCACTGAATATGAAGTTGATGAGGGTGAAGTGGAAGACAGTGAGAATGAAGAAACTCATGAAGGCCAAGAGCATTCATCCAGTGACTTGGAAGATTCTGATGAAGAACGTAAAAGATATGATGAACAAATGGATGAGCTACTTGAACAAGCTTATGAGCGGTTTGTGATAAAAAAAGAAGGAAGTACAAAGCAGCGCAAGCTTATTAAGAATTCCTTTGATGCGGAGGCCCAACTTTTGAAGGATGGCGAGGATGATGATATTGTTGAGTCCAAATATGAATCAGATGAAGATCAGGGTAATCAAGAAGCAAATCCTTTGATGGTGCCACTTAATGATGGGGCAGAGCCCACCCAAGAGGAAATCACAAATAAGTGGTTTAGTCAGGATGTCTTTGCTGATGCTGTAGAGGATGGAGACTTTGATAAATATGATAGTGAAGATGAAATGGATATAGATGGGCCAAAGGAAAAGGTGTCTGTACCAAAAAAGGCCAAAGAAAACCAAACAACAGCTTCTGCAGCCCTCGATCGCCCTCAATCTCAAGCATCCAAGGGAGAGGATGATTTTGAGATAGTTCCTGCACCTGCTACTGATTCAAGTGATGATTCATCCTCTGATGAATCAGGGGAGGAAGATACTGAAACCAAAGCTGAGATACTGGCTTATGCTAAGAAGATGCTTAGGAAAAAGCAACGGGAGCAGATCCTAGATGATGCATATAATAAGTACATGTTTGATGATGAGGGATTGCCCAAGTGGTTTCTAGATGAGGAGAGGAGACACCGCCAACCAATAAAGCCTGTCACCAAAGAGGAAATTGCTGCAATGAGAGCGCAATTCAAAGAAATTGATGCTCGGCCTGCAAAGAAGGTTGCAGAGGCCAAGGCACGAAAGAAACGTGCTGAAATGAGGAAGCTTGAGAAGATACGTAAGAAGGCCAACACTATATCAGATCAGGCTGATATATCTGATCGTTCGAAGAGGAAGCAAATTGAACAGCTATATAAAAAGGCAGTTCCGAAGAGGCCTCAAAAGGAATATGTAGTTGCAAAGAAAGGTGTCCAAGTAAAGACTGGCAAGGGTAAAGTCCTAGTTGATCGCAGAATGAAGAAGGATGCTAGGAAACGTGGAGTGGGAAAGCCAGGAAAAGGGGGTTCCAAGGTGAAGGGCAAGGGCAAGGCTCCAAAGGGCAAAGGATCTTCACAGGCCTCTGCCAAGAAGGGAAGAAAGGGCAATAAATGA 2499 0.4762 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFRFLESATAVLDLCAAPGGWMQVAVQRLPVGHLVLGVDLAPIAPIRGAIAIQEDITRPECRTRVKKIMDEHRCAAFDVILHDGSPNIGGAWAQEAMSQNALVIDSVKLATQLLAPKGIFVTKVFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVVGLRYKAPAKIDPRLLDVKHLFQGSGEPQAKVIDVLRDNKQKRHRDGYEDGVSTLRKESSASNFIWSDAPLDILGSVTSITFTDPADLPIKDHELTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALSSAEKPDPSTKAETEKEPEVDEEDRILNEMEELTHTMERKKKRAKKLLAKRKAKEKARKATGMQIDAIEDGYVDQELFSLSSIKGKKDLVAVDTTEYEVDEGEVEDSENEETHEGQEHSSSDLEDSDEERKRYDEQMDELLEQAYERFVIKKEGSTKQRKLIKNSFDAEAQLLKDGEDDDIVESKYESDEDQGNQEANPLMVPLNDGAEPTQEEITNKWFSQDVFADAVEDGDFDKYDSEDEMDIDGPKEKVSVPKKAKENQTTASAALDRPQSQASKGEDDFEIVPAPATDSSDDSSSDESGEEDTETKAEILAYAKKMLRKKQREQILDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPVTKEEIAAMRAQFKEIDARPAKKVAEAKARKKRAEMRKLEKIRKKANTISDQADISDRSKRKQIEQLYKKAVPKRPQKEYVVAKKGVQVKTGKGKVLVDRRMKKDARKRGVGKPGKGGSKVKGKGKAPKGKGSSQASAKKGRKGNK* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3156 832 MobiDBLite consensus disorder prediction 792 813 - -
Dod03g3156 832 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 1 802 - -
Dod03g3156 832 MobiDBLite consensus disorder prediction 770 832 - -
Dod03g3156 832 MobiDBLite consensus disorder prediction 436 461 - -
Dod03g3156 832 PANTHER RRNA METHYLTRANSFERASE-RELATED 1 802 - -
Dod03g3156 832 MobiDBLite consensus disorder prediction 712 747 - -
Dod03g3156 832 MobiDBLite consensus disorder prediction 421 435 - -
Dod03g3156 832 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 202 IPR029063 -
Dod03g3156 832 MobiDBLite consensus disorder prediction 421 461 - -
Dod03g3156 832 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 202 IPR015507 GO:0001510|GO:0008168
Dod03g3156 832 Gene3D Vaccinia Virus protein VP39 19 208 IPR029063 -
Dod03g3156 832 Coils Coil 708 730 - -
Dod03g3156 832 CDD AdoMet_MTases 46 161 - -
Dod03g3156 832 MobiDBLite consensus disorder prediction 495 517 - -
Dod03g3156 832 Coils Coil 348 382 - -
Dod03g3156 832 Pfam FtsJ-like methyltransferase 22 200 IPR002877 GO:0008168|GO:0032259
Dod03g3156 832 MobiDBLite consensus disorder prediction 567 582 - -
Dod03g3156 832 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 802 IPR028589 GO:0008649|GO:0031167
Dod03g3156 832 MobiDBLite consensus disorder prediction 583 598 - -
Dod03g3156 832 Pfam Domain of unknown function (DUF3381) 235 383 IPR024576 -
Dod03g3156 832 MobiDBLite consensus disorder prediction 495 636 - -
Dod03g3156 832 Coils Coil 448 468 - -
Dod03g3156 832 Pfam Spb1 C-terminal domain 603 795 IPR012920 GO:0005634|GO:0006364|GO:0008168
Dod03g3156 832 MobiDBLite consensus disorder prediction 726 747 - -
Dod03g3156 832 MobiDBLite consensus disorder prediction 327 350 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3156 K14857 - gmx:100790741 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3156 03 64199661 64205114 Dod03g3156 03 64199661 64205114 ECH