Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3138 ATGCCTTCCAGAAGAAGAACTCTCTTGAAGGTCATCATTCTCGGTGACAGCGGGGTGGGGAAGACATCTTTGATGAATCAATATGTGAATAAGAAATTTAGCAATCAGTACAAAGCAACCATCGGAGCGGACTTTTTAACCAAGGAAGTGCAATTTGAAGATAGGCTTTTCACCTTACAGATTTGGGATACAGCTGGCCAGGAAAGATTCCAAAGCCTAGGAGTTGCTTTCTATCGTGGTGCTGATTGCTGTGTTCTTGTCTATGATGTTAATTCAATGAAATCATTTGATAACCTTAACAACTGGAGGGAGGAATTTCTGATTCAGGCAAGTCCTTCGGATCCAGAGAATTTTCCTTTTGTTGTTATAGGAAACAAGATAGATATTGATGGTGGGAACAGTAGAGTGGTTTCGGAAAAGAAGGCCCGGGCTTGGTGTGCATCAAAAGGAAATATCCCATATTTTGAGACATCTGCCAAGGAAGGTATTAATGTTGAAGAAGCATTCCAATGCATAGCAAAGAATGCCCTGAAAAGTGGGGAAGAGGAAGAATTATACCTTCCCGACACAATTGATGTTGGAAACAGCAGTCAGCAACGGGCATCATCGGGCTGTGAGTGCTGA 624 0.4231 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVIGNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEELYLPDTIDVGNSSQQRASSGCEC* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3138 207 PANTHER RAS-RELATED PROTEIN RABG3F 1 207 - -
Dod03g3138 207 PRINTS Transforming protein P21 ras signature 50 72 - -
Dod03g3138 207 PRINTS Transforming protein P21 ras signature 9 30 - -
Dod03g3138 207 PRINTS Transforming protein P21 ras signature 116 129 - -
Dod03g3138 207 PRINTS Transforming protein P21 ras signature 154 176 - -
Dod03g3138 207 PRINTS Transforming protein P21 ras signature 32 48 - -
Dod03g3138 207 CDD Rab7 9 182 - -
Dod03g3138 207 Gene3D - 2 188 IPR027417 -
Dod03g3138 207 SMART rab_sub_5 9 179 - -
Dod03g3138 207 ProSiteProfiles small GTPase Rho family profile. 2 180 - -
Dod03g3138 207 Pfam Ras family 10 177 IPR001806 GO:0003924|GO:0005525
Dod03g3138 207 TIGRFAM small_GTP: small GTP-binding protein domain 9 172 IPR005225 GO:0005525
Dod03g3138 207 SMART ras_sub_4 6 179 - -
Dod03g3138 207 ProSiteProfiles small GTPase Rab1 family profile. 3 207 - -
Dod03g3138 207 SMART rho_sub_3 11 179 IPR001806 GO:0003924|GO:0005525
Dod03g3138 207 ProSiteProfiles small GTPase Ras family profile. 3 207 IPR001806 GO:0003924|GO:0005525
Dod03g3138 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 182 IPR027417 -
Dod03g3138 207 SMART ran_sub_2 14 201 - -
Dod03g3138 207 PANTHER RAB FAMILY 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3138 Dod-Chr3 64026103 64030068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3138 K07897 - gmx:100305642 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3138 03 64026103 64030068 Dod03g3138 03 64026103 64030068 ECH