Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3137 ATGGAAGAAAATCAAACCCTTATTCGAACAGAGAACTCCCCAAAGCAGCACGCGCAGAACACACACTTTGCACTGAACACATTTCACATAGCCCCTCCGATGGAGGAGAAACGCCCCTCCGCCGCACCTCCCCCTCCCTCATCCGCCGTCGCCGATTCCCCAGCATCGGAGGCCGCATCAACGCGCCGCCGCGCCGGAGCTCAGAAGCGTAAATCCAGCGCCTTCGGCAGCGCGTCCAATTCCTCTTCCTCCACGCCCTCCTCGAAGCGCGTCACTCGCGACAAGCCCTCCCCTCTCCACCACACTCCTCCTCTCCACCACAATGGCCCCCTCACCAGAGCTCGTCAAACCCCCGCCGCCGCCGCCGCCTCGTCTTCTGCTCCCGGCGGTCCTTCATCTGCTCCCGCCGCCGTGAAGCACTGGGAGCGCGGAGGACAGGCGCTGGGAGGAGACTCTGTTGCGGCTATGGCGGAGGAGCTCAGGAAGGAGAGCGAGCGGGAGTCTCTGGAAGCTTCGATTGAAGCTGAGTTCGAAGCTATCAGATCTCGCGGAACCGATACTCACGTCGTTCCTACTCATTGTGGTTGGTTTTCATGGACAGATATTCATCCAATTGAGAAGCATATGATGCCTTCTTTCTTTAATAGCAAAACTGAAAGTCGGACTCCTGATATATATATGGAGATAAGGAACTGGATAATGAAGAAGTTTCGTGCAAATCCCAACATACAAATAGAATTGAAAGATTTGTCAGAGCTTAATGTTGGAGACTTGGATGCTAGGCAAGAGGTAATGGAGTTTTTGGACTATTGGGGTTTAATTAATTTCCACCCGTTCCCTTTGATGGGTAACATGGGTTCTGCTGCGGCCAGTGCCGGTGATGATGGGGAAGCAGAAAAGAATTCCTTGCTTGAAAAATTGTTTCACTTTGAAACTCTCCAATTATGTCCGCCTGTTGTTCAAAAGACTAGCCTAATGACTCCAGCTATGACCTCTGGCTTGTTTCCAGAGTCTGCAATTGCTGAAGAGTTGGTGAAACAAGAGGGGCCTGCAGTTGAGATGCTTGAATATCATTGCAACTCTTGTTCCGCTGATTGTTCTCGCAAACGTTACCATTGCCAGAAGCAGGCAGACTTTGATCTATGCACCGACTGCTTCAGTAACAGGAGATTTGGCTCCGGCATGTCTTCGTCGGATTTTATACTCATGGAACCAGCTGAAGTTGCAGGGGTTAGTGGTGGAAATTGGACTGATCAGGAGACTCTTCTGCTTCTCGAAGCACTAGAACTTTACAAAGAAAATTGGAACGAAATTGCAGAACACGTTGGAACAAAATCAAAAGCTCAATGCATTTTGCACTTTGTTCAAATGCCAATTGAGGATGCCTTTATGGATTGTAATGATGATGTTGAAGCCACTTGCAAAGAAACAGCAGAACCAGCTGCAACTAACAATGATGCATCTGCACATAAAGACACTTCAGAATGTACTGAGAATAACACTAGTGATACCATCGAAAGCCATGGCGAAGCTTCAAAGTTTGAAGATGCTAAGGTGAAAGTTAATCAGGAGACTCCGAGGCCAGAAGATGGTAGTGGTGAGAAAACTAGTGAGGAAACTTCTAAGTCTGAAGATGCTGATAAAGTAAAATTTAATCAGGAAGTAGGCAATGACTGTGCTCTAAATGCTCTTAAGGAAGCATTTGCAGCTGTTGGTTATTCTCCTGGACCTGATGGCCCATCCTCATTTGCTGAAGTGGGTAATCCTGTCATGGCATTGGCAGCTTTCCTTGCACGCTTGGTGGGTTCTGATGTGGCTATTGCTTCAGCTCATAGCTCCTTAAAATCCATGTCTGGAAATTCTCCTGGCACCGAGCTAGCTGCAAGGAATTGCTTTATTCTGGAAGATCAACCAGATAATAAGAAGGAACAAACTACTTGTGAGAGGGATTCTAAAAATGAGGGAGATCAGGATGAGATAAATGGAAAACAGGATAAACTGATTTTAGATGATAAAGATTTACCACATGATAACCGCAACATGATAATCGAAAACAATGCTTTAGAAAACAAGAGACAGGTGGCTTCTACAGATGATGGAGATTCACAAAAATCAATTGCTTCAAAAGAGCAAGCTATTGTTAATCATGAAGAGTCCGGACTAGACAATTGCAATGATCCTAGCAATTCAAAGTTACCTGATGATCAAGCACCAACCACTCTGCATGATTCAGGTTCAAATTCCAAGGCTGAAATTCCACCTAATCCTGAGGAGCTTCAGGAGGGAACTCCGAGTAAAGAACCTTGCCATCCTGTAGAGGAAACAATAGTCACACATGTGCCCGATTCCTGTCCATCAGACAAGAATGATCTTCAGCAGTCTGTTAAATCCAATATATCAGTAAACCATCCCCGGACGGTGGAGGCGACAAAAAATACTGAGATGGTGTCCGATTCTATGCCCTCAGATAATAGCAACCCACAAAAACTATCAACAAGTTTAGTTCACGAGTCTCTGCAATCGAAGGACTCAGTGATGGATGTTGATATGGCTTCAAATTCCTTGCTATCAGAGAAGAGCGAATCTCACCCACCATGCTCATCAAATAATGGGGCAGAAAATGATGTGGATATGGTGTTACCTTCACAGCCAGTTGGATCAAATGCTGGCACCGAAAATGGCACAAACACAGGTGTAGATCACACTGAAAATGGCACGAAGGCAAAAGATGATAGTATGAAGACAAAACATAATAACAATTTTGAGAAAGTAAAACATGCAGCAGTTACAACACTTGGGGCAGCAGCAGTGAAGGCAAAACTTCTAGCAAATCAGGAAGAAGACCAAATTCGACAACTTACTTCTTCATTGATAGAAAAGCAGTTGCATAAGTTGGAAACAAAGTTGGTTTTTTTCAATGACATGGAGAATGTAGTGATGAGGGTAAAGGAGCATTTAGAGCGGTCACGGCATAAGCTTTTCCATGAGCGTGCTCTGATAATCGCATCCCGGCTTGGTTTACCAGCTTCCTCATCTAGAGGTGTACCACCATCCTTACCAGCTAATAGAGTTCCTATGAATTTTGCAAACTCACTCCCAAGATCTCAAATCATGATGAATCCCCAGAGGCCACCGATTCCAAGACCTGTGGGTCCTGTAGCTACTACTCTTCCAAACCCGTTAGCATCTGCAACTGCAGCCGGAAATTCAGTTCGGCCGTCCAGCCAAGAAAAGCTTTCTTCTATTGGGACGAAATAA 3258 0.4576 MEENQTLIRTENSPKQHAQNTHFALNTFHIAPPMEEKRPSAAPPPPSSAVADSPASEAASTRRRAGAQKRKSSAFGSASNSSSSTPSSKRVTRDKPSPLHHTPPLHHNGPLTRARQTPAAAAASSSAPGGPSSAPAAVKHWERGGQALGGDSVAAMAEELRKESERESLEASIEAEFEAIRSRGTDTHVVPTHCGWFSWTDIHPIEKHMMPSFFNSKTESRTPDIYMEIRNWIMKKFRANPNIQIELKDLSELNVGDLDARQEVMEFLDYWGLINFHPFPLMGNMGSAAASAGDDGEAEKNSLLEKLFHFETLQLCPPVVQKTSLMTPAMTSGLFPESAIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCTDCFSNRRFGSGMSSSDFILMEPAEVAGVSGGNWTDQETLLLLEALELYKENWNEIAEHVGTKSKAQCILHFVQMPIEDAFMDCNDDVEATCKETAEPAATNNDASAHKDTSECTENNTSDTIESHGEASKFEDAKVKVNQETPRPEDGSGEKTSEETSKSEDADKVKFNQEVGNDCALNALKEAFAAVGYSPGPDGPSSFAEVGNPVMALAAFLARLVGSDVAIASAHSSLKSMSGNSPGTELAARNCFILEDQPDNKKEQTTCERDSKNEGDQDEINGKQDKLILDDKDLPHDNRNMIIENNALENKRQVASTDDGDSQKSIASKEQAIVNHEESGLDNCNDPSNSKLPDDQAPTTLHDSGSNSKAEIPPNPEELQEGTPSKEPCHPVEETIVTHVPDSCPSDKNDLQQSVKSNISVNHPRTVEATKNTEMVSDSMPSDNSNPQKLSTSLVHESLQSKDSVMDVDMASNSLLSEKSESHPPCSSNNGAENDVDMVLPSQPVGSNAGTENGTNTGVDHTENGTKAKDDSMKTKHNNNFEKVKHAAVTTLGAAAVKAKLLANQEEDQIRQLTSSLIEKQLHKLETKLVFFNDMENVVMRVKEHLERSRHKLFHERALIIASRLGLPASSSRGVPPSLPANRVPMNFANSLPRSQIMMNPQRPPIPRPVGPVATTLPNPLASATAAGNSVRPSSQEKLSSIGTK* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3137 1085 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 414 450 IPR017930 -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 637 679 - -
Dod03g3137 1085 SUPERFAMILY RING/U-box 349 409 - -
Dod03g3137 1085 Gene3D - 194 279 IPR036388 -
Dod03g3137 1085 Pfam SWIRM-associated region 1 930 1007 IPR032451 -
Dod03g3137 1085 ProSiteProfiles Myb-like domain profile. 414 458 IPR001005 -
Dod03g3137 1085 SMART sant 412 460 IPR001005 -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 719 835 - -
Dod03g3137 1085 CDD SANT 432 457 IPR001005 -
Dod03g3137 1085 CDD ZZ_RSC8 357 401 IPR041984 -
Dod03g3137 1085 ProSiteProfiles Zinc finger ZZ-type profile. 354 408 IPR000433 GO:0008270
Dod03g3137 1085 MobiDBLite consensus disorder prediction 7 26 - -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 508 549 - -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 1058 1085 - -
Dod03g3137 1085 SUPERFAMILY Homeodomain-like 411 465 IPR009057 -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 884 902 - -
Dod03g3137 1085 Pfam Zinc finger, ZZ type 356 391 IPR000433 GO:0008270
Dod03g3137 1085 MobiDBLite consensus disorder prediction 637 706 - -
Dod03g3137 1085 PANTHER SWI/SNF COMPLEX-RELATED 82 1049 - -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 721 753 - -
Dod03g3137 1085 ProSiteProfiles SANT domain profile. 411 462 IPR017884 -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 480 549 - -
Dod03g3137 1085 SMART zz_5 353 397 IPR000433 GO:0008270
Dod03g3137 1085 MobiDBLite consensus disorder prediction 1042 1085 - -
Dod03g3137 1085 Pfam SWIRM domain 191 276 IPR007526 GO:0005515
Dod03g3137 1085 MobiDBLite consensus disorder prediction 683 706 - -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 855 876 - -
Dod03g3137 1085 ProSiteProfiles SWIRM domain profile. 188 285 IPR007526 GO:0005515
Dod03g3137 1085 Gene3D - 411 462 - -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 1 137 - -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 785 835 - -
Dod03g3137 1085 Pfam Myb-like DNA-binding domain 414 456 IPR001005 -
Dod03g3137 1085 ProSitePatterns Zinc finger ZZ-type signature. 359 385 IPR000433 GO:0008270
Dod03g3137 1085 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 82 1049 - -
Dod03g3137 1085 SUPERFAMILY Homeodomain-like 195 277 IPR009057 -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 855 914 - -
Dod03g3137 1085 MobiDBLite consensus disorder prediction 72 92 - -
Dod03g3137 1085 Gene3D - 351 399 IPR043145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3137 Dod-Chr3 64015651 64024428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3137 357 454 EF-hand Containing Proteins AT3G07740 38.318 2.30e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3137 K11649 - gmx:100799723 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3137 03 64015651 64024428 Dod03g3137 03 64015651 64024428 ECH