Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3123 ATGAGGAACACCGCGCATTCTCTCCGCAAATCGAAGATCGTAACTGCCGTAGCAATTGGAGTCCTCATTGGGTGCATCTTCGCTTTCTTGTACCCAAATGGGTTCCTCTTCAATTCCGTAGCTTCCACCTCAAATCGCCACCTTTCCGTTGCGGGATCCAAAACCCAGGAAAATGCAGCTGAATGTGAATCCTCAGATCGGGTCAACATGTTGAAATCAGAGCTGATGGCAATATCAGATAAAAATGCTGAGCTGAAGAAGCAAGTGAGGGAGTTGACCGAGAGGCTTCGGTTTGCAGAGCAAGGGAAAGATCAGGCTCAAAAGCAGTTTCTTGCATTGGGTAAACAGCACAAAGCTGGACCTTTTGGCACTGTCAAGGGATTGAGAACCAACCCTACTGTTGTTCCTGATGAATCTGTGAACCCGAGATTGGCAAAGCTATTAGAGAAAATTGCAGTTAAGAAAGAGCTTATAGTTGCACTTGCAAACACTAATGTGAAGGAGATGCTGGAGGTCTGGTTCACCAATATCAAGAGAGTTGGTATAACTAATTATCTGGTTGTTGCTTTAGACAATGGGATTGCAAAGTTTTGTGAAACAAATCAAGTCCCGGTGTATAAGAGAGACCCAGATGAAGTTGTTGATAAAATTGGAAAGATAGGAGGGAACCATGTTGTCTCCGGGCTTAAATTTCGCATTCTAAGAGAATTTTTGCAGTTGGGATATAGTGTTCTTCTATCAGATGTTGACATTGTGTATTTGCAGAACCCTTTTGATCATCTTTACCGGGATTCAGATGTGGAGTCAATGAGTGATGGTCATGATAACAGGACAGCTTATGGTTTTAACGATGTCTTCGACGAACCTGCAATGGGTTGGGCTCGTTACGCTCACACTATGAGGATATGGGTGTACAACTCTGGATTCTTCTACATAAGACCAACAATCCCTTCAATTGAGCTTTTGGATCGTGTCGCGACTAGGCTTTCCAAGGAAAAAGCATGGGACCAGGCCGTTTTCAATGAGGAACTCTTTTTCCCATCACATCCCGGTTACGATGGTCTTCAAGCTGCCAGAAGAACTATGGATATGTATCTCTTCATGAATAGCAAGGTTCTCTTCAAGACAGTGAGGAATGATGCTAACCTCAGCAAACTGAAACCAGTAATTATTCATGTGAATTACCACCCTGACAAGCTTCGACGAATGAAAGCTATCGTTGAATACTATGTTGATGGGAAGCAGGATGCTCTCAAACCTTTCCCAGAAGGCTCAGATTGA 1281 0.4356 MRNTAHSLRKSKIVTAVAIGVLIGCIFAFLYPNGFLFNSVASTSNRHLSVAGSKTQENAAECESSDRVNMLKSELMAISDKNAELKKQVRELTERLRFAEQGKDQAQKQFLALGKQHKAGPFGTVKGLRTNPTVVPDESVNPRLAKLLEKIAVKKELIVALANTNVKEMLEVWFTNIKRVGITNYLVVALDNGIAKFCETNQVPVYKRDPDEVVDKIGKIGGNHVVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHDNRTAYGFNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFFPSHPGYDGLQAARRTMDMYLFMNSKVLFKTVRNDANLSKLKPVIIHVNYHPDKLRRMKAIVEYYVDGKQDALKPFPEGSD* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3123 426 Pfam Nucleotide-diphospho-sugar transferase 182 403 IPR005069 -
Dod03g3123 426 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Dod03g3123 426 PANTHER ARABINOSYLTRANSFERASE RRA3 2 423 IPR044290 GO:0016757|GO:0080147
Dod03g3123 426 PANTHER ARABINOSYLTRANSFERASE RRA1-RELATED 2 423 - -
Dod03g3123 426 SUPERFAMILY Nucleotide-diphospho-sugar transferases 158 355 IPR029044 -
Dod03g3123 426 Coils Coil 68 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3123 Dod-Chr3 63794219 63797098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3123 K20783 - gmx:100804189 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3123 03 63794219 63797098 Dod03g3123 03 63794219 63797098 ECH