Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3122 ATGGGGAAAGGAGGTGGTTGCATACCAAGCAAGAAGAAGGTACCAATTTCTGAGCTAGAAGAAAAGAATGAACCTGTTAGTGTTGAAAGCCAAACAAAGAATGATACAACAACTAGTACTACAAGGAGAGAAGTGGCACCACCCCAAGAAGTGAAGAAGCTAAATGTTTTCATTGTGTATTACTCAATGTATGGCCATGTGGAGTCACTGGCTAGATCTATGAAGAAAGGGGTTGACTCCATTGAAGGGGTTGAAGGGGTGTTGTACCGGGTGCTGGAGACACTGCCTAAGGAGGTTCTGCAGCTGATGCATGCACCAGAGAAGGATGAAGGGGTGCCACTGATATCTGCAGAGAAGTTGGTGAAGGCTGATGGGTTGCTCTTTGGGTTCCCAACAAGGTTTGGAAGCATGGCAGCACAAATGAAGGGGTTCTTTGATACTACAGGTCAGTTGTGGACTGAGCAGAAGCTGGCTGGAAAGCCTGCTGGCTTCTTTGTCAGCACTGGCACTCAGGGTGGTGGCCAAGAAACCACAGCTTGGACAGCAATCACACAGTTAGCCCACCATGGTATGCTCTATGTTCCTATTGGTTACACCTTTGGTGCTGGCATGTTTGAAATGGAATCCATCAAAGGAGGATCTCCATATGGTGCTGGAGCTTTTGCTGGAGATGGCTCAAGGCAAGCAAGTGAAGCAGAGCTGGCCATTGCTGAGTATCAAGGCAAATACATGGCCACAATAGTCAAGAAGTTAGCACAGAAAAGCTAG 768 0.474 MGKGGGCIPSKKKVPISELEEKNEPVSVESQTKNDTTTSTTRREVAPPQEVKKLNVFIVYYSMYGHVESLARSMKKGVDSIEGVEGVLYRVLETLPKEVLQLMHAPEKDEGVPLISAEKLVKADGLLFGFPTRFGSMAAQMKGFFDTTGQLWTEQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLYVPIGYTFGAGMFEMESIKGGSPYGAGAFAGDGSRQASEAELAIAEYQGKYMATIVKKLAQKS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3122 255 Gene3D - 52 252 IPR029039 -
Dod03g3122 255 MobiDBLite consensus disorder prediction 1 46 - -
Dod03g3122 255 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 56 251 IPR010089 GO:0003955|GO:0010181
Dod03g3122 255 SUPERFAMILY Flavoproteins 55 251 IPR029039 -
Dod03g3122 255 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 4 255 - -
Dod03g3122 255 MobiDBLite consensus disorder prediction 29 45 - -
Dod03g3122 255 Pfam NADPH-dependent FMN reductase 117 196 IPR005025 GO:0016491
Dod03g3122 255 MobiDBLite consensus disorder prediction 14 28 - -
Dod03g3122 255 ProSiteProfiles Flavodoxin-like domain profile. 56 244 IPR008254 GO:0010181
Dod03g3122 255 PANTHER NAD(P)H:QUINONE OXIDOREDUCTASE, TYPE IV PROTEIN 4 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3122 Dod-Chr3 63778481 63780739 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3122 K03809 - gmx:100809530 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3122 03 63778481 63780739 Dod03g3122 03 63778481 63780739 ECH
Dod03g3122 03 63778481 63780739 Dod02g0601 02 7796282 7799697 ECH