Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3116 ATGAAGACCTTGAGTCCCTTAAACTCCTCAAATCCATGTCTTCCCAAGACCCATTTCCTCAAAGTCCCCATCTTTAACACCATCTTCAAGTTCAAGCCATTCCCACACAACACCCATCATGCAAGGAGAGCTCAAGCTCCCTCATTTACCATCACTTGCAAGCTGAAAGTCTCTCAAGATATCAAAAACAAAGGGAAAAAGGGTGTACCCCAGAAGATAGTCTTATCAGAAACTACATCTCCTCCACTTGCAGAGGAAGGTGACAATATCAATGGTGGCAGTGGCAGTGGCGATAGTAATGTATCAGTAGGGTCAAAGAATAAGGGAGGACTTTCTGGGGTGGCCAAGATGCTGAGCAAAAGGGTGTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGGGAAATGTTCACTATAGCTGCTTTAATGGCTTTGGGAACTATTATTGAGCAAGGTGAGGCCCCTGACTTTTACTTCCAGAAATACCCTGAAGATCATCCTGTGTTGGGATTTTTCACTTGGAGATGGGTTCTAACCCTTGGTTTTGACCACATGTTTACATCCCCCGTGTTTATTGGAATGTTGGCACTCCTGGGCGCATCCCTTATGGCCTGTACCTACACAACACAGATTCCACTAGTCAAGGTTTCAAGAAGATGGTCATTTTTGCATTCTGCTGAGGCTATACGTAAGCAGGAATTTTCAGACTCATTGCCAAGAGCATCAATCGAAGATGTCGGTACTCTATTGATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCATGTTTATATGCTTTTCAAGGGCTTGCTGGTCGGCTGGCCCCTATTGGAGTCCATATAGCACTGCTGCTGATAATGGCTGGAGGGACTCTTAGTGCTACTGGCAGCTTCAGAGGTTCTGTCACTGTGCCCCAGGGACTGAACTTTGTTGTAGGAGATGTTCTAGGTCCCATTGGCTTTCTATCTTCTCCCACTGAAGCTTTTAATATAGAGATTCATGTCAACAGATTCTACATGGATTATTATGACAGTGGAGAGGTTTCTCAGTTCCACACCGATCTTTCCCTCTTTGACATGGATGGGAAAGAAGTAATGAGGAAAACAATTAGTGTAAATGATCCTTTAAGATATGGCGGTATCACCATATATCAGACAGATTGGAGTATTTCGGCACTGCAAATTCTTAAGGACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTAAAAATCAATGGTGATAAGAAACTTTTTGGTACTTTTCTACCCGTTGGAGATATCAACTCTTCTGATGTTAAGGGAATATCTATGCTTGCTCGTGATCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTCGCAGGAGTTAGACGACCAAATTCGAAGCTGCCAATCAATATTAATGGCACAGAAATTGTCATTCTTGATGCAATAGGGAGTAGTGGCTTGGACTTGAAGACTGACCCAGGAGTGCCAATTGTATATGCTGGATTTGGTGCTCTAATGCTCACTACTTGCATCAGCTATTTGTCTCATTCACAGATATGGGCCTTACAAGATGGGACAACAGTAGTTATTGGAGGGAAGACTAACAGAGCAAAGATGGAGTTTCCAGAAGAGATGAACCGCTTGCTTGATAAGGTGCCTGAAATAGTTGAATCATCTCCATCTCAACAAGCTGACACCATTAGTGGCTAA 1704 0.4319 MKTLSPLNSSNPCLPKTHFLKVPIFNTIFKFKPFPHNTHHARRAQAPSFTITCKLKVSQDIKNKGKKGVPQKIVLSETTSPPLAEEGDNINGGSGSGDSNVSVGSKNKGGLSGVAKMLSKRVLQILSNLPLAIGEMFTIAALMALGTIIEQGEAPDFYFQKYPEDHPVLGFFTWRWVLTLGFDHMFTSPVFIGMLALLGASLMACTYTTQIPLVKVSRRWSFLHSAEAIRKQEFSDSLPRASIEDVGTLLMGAGYEVFLKGPCLYAFQGLAGRLAPIGVHIALLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLGPIGFLSSPTEAFNIEIHVNRFYMDYYDSGEVSQFHTDLSLFDMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLFGTFLPVGDINSSDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPININGTEIVILDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCISYLSHSQIWALQDGTTVVIGGKTNRAKMEFPEEMNRLLDKVPEIVESSPSQQADTISG* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3116 567 MobiDBLite consensus disorder prediction 75 104 - -
Dod03g3116 567 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 119 548 IPR023494 -
Dod03g3116 567 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 78 557 IPR023494 -
Dod03g3116 567 Pfam ResB-like family 434 543 IPR007816 -
Dod03g3116 567 Pfam ResB-like family 131 395 IPR007816 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3116 30 559 Miscellaneous Gene Families AT1G49380 70.677 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3116 K07399 - gmx:100807003 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3116 03 63726491 63731388 Dod03g3116 03 63726491 63731388 ECH