Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3089 ATGGCTTCGCTCCTGAAGAAGCTGCGACATGGTGTGCCTTCAGTTGTTGATGATGGTGGTGATACTGAATACAGTGTTGAGTATTCCTTTGCTGAGGAATACAAAGGCCCTCCTTTGGGTTACTCCATCCCTGAAGTACCTGCTTTCAAACTTGAACAAATCCCAGTTGCCCCTATAGCACCTTCTTCCCTTAATCATTCCTCAGTCCCGGTTATCCAACCTTTCAGAAAAACAACCAATGCCACAATACTTTCTTCTGTTCCCTCTTCAAACTCTTCACGCCCTCATGCACTTGAATCAAAAAACTTTGGTGATGATCGCAAAGAAGATATAGGGTTTCATATTGAAGTGAATCCCATTCCCACAAATTCTGACACAGCAGAATGCTCAACATCTCTTTCTGTTTCTTCTGAGATATTTTCATGCAAAGAAGAGGATGATGATCTTAACGATGAACCTATTAGTCCTAAACATGTTAAACGCCCTTCTGCTGTCACATTTCGGTATCCTGAGTCAAATGGCATGGTAGATGTTGATGAAGACTATGTTGATTCTGAGTGTGGAAGTGGGATAAGTACCCCTGTGATCTATGAGAGGCCACAGCATGCTGTGAGAGCTGGGAAGAAAGGAACGTGCTACCGATGCCTCAAGGGGAACCGGTTCACTGAGAGGGACGTTTGCATTGTTTGCAGTGCAAAGTATTGCCGCAAGTGTGTGCTTAGAGCAATGGGGTCTATGCCTGAAGGAAGAAAGTGTGTTACCTGCATTGGTTGCGGGATTGATGAGGATAAGAGGAGGAACCTTGGGAAGTCCTCAAAGATGCTCAAGCACTTGTTGACCGATGTGGAAGTCAAGAAAATCATGCATGATGAGATGTTTTGTGAAGCAAATCAGATACCTGCAGAGAAGGTTTGTGTCAATGGGGACCCTCTTGATAGGGATAAACTCATGTTGCTTCTGACCTGTGCAAACCCTCCAAAAGAATTGAAACCAGGCTTCTATTGGTATGATAAAGCATCTGGATTTTGGGGAAAGGATGGTCAAAGGCCAAGTCAAGTTATCAGCCCCGAGCTTGATGTTGGGGGTCACTTGCAGAGAGATGCAAGTGGTGGAAAGACAAAAGTAACTATAAATGGTCGTGAGATTACTAAAGAAGAGCTATTGGTACTCAAGTTCGCAGGAGTGCAGTGTGAAGGAACAACTGACTTCTGGGTGAGTCCTGATGGAGCATACATGGAAGTGGGACAGAAGAATGTCAAGGGGCATATATGGGATAAGTTTGGAGCAAAGGTAGCTTCTAAAGTTCTGTCAGTGCCAATTCCTTCCAATTCTGTGACTTCTACTGGAGAAGGAGATGGAGTCAATAGAGATAGCCAAGACAGCCATCAACAGAATATGCTTCACAAATTTTTACTTGTTGGTTCTCTCAAGTCTGGAACAAGTACTATATTTAAACAGGCCAAGCATTTGTATAATATTCCTTTCTCTGAAATTGAACGCCAAAATATCAAGTTGGTAATTCAGAGAAACTTGTGTACCTACCTTGGCATGCTGCTGGAAGGGCGTGAAAGTTTTGAAGAGGAGAGTTTGTTGGAGAAAAGGAATAGACATCATGTTGATGAATCCACTTCATCTGCAGGGAATACTGGTGAGATCATTGAAACAACAATCTATTGTATTGGCCCAAGACTTCAAAATTTCGCAGATTGGCTAATCAAATACATGGTTTCTGGTAACTTGGATACAATATTTCCCGATGTTATTGACAAATATGGGCCGCTAGTGGAGGAGCTGTGGGCTGATGCAGCCATTCAGGCCACATACAACAGGAGTCATGAACTGAAAATGCTACCCAGAAGTGCAACTTATTTCCTAGACCGGGCTGTTGAGATTTCTAAGACAGATTATGAACCCTCTGACATGGACATCATGTATGCTGAGGGGATAAACCTATCCAACAGCATTACTTCGATGGAGTTTTCATTTCCTGCATTAGATGCTGAGGCCTCCTTGGAACCTGGGTATCAACATGATCCTTCTCTCAATGCTTATAGATACCAACTCATCAGAGTACATCCAACAAGCCTTGGAGAAAACTGCAAGTGGTTGAACATGTTTGAAGACACAGATGTTGTCTTATTTTCTGTTGCCTTAACTGACTATGATGAGTACATTGTAGACAGTAACGGAGTTTCTACCAACAAAATGTTACTAGCCAAGCATCTCTTTGAAAACATCATTACTCATAGAGTCTTCAGTAACAAGAAATTCCTACTACTACTGACCAAATTCGATCTGCTTGAGGAAAAGATAGAAGAGATACATCTAACACAATGTGAATGGTTTAATGACTTCAATCCAGTTATCAGCCACAATCACAGGCGGTGTAGCACTAGTAATAATAACCATACTAATAGCCCTCCATTACCTCATCGTGCTTTTCAATACATTGCTATGAAGTTTAAGAGTTTGTTCCATTCTCTTACTGGCGGCGGAAAGCTCTTTGTTTCACTGGTTACTGGTTTGGAACCTGATACTGTTGATGAAGCTCTCAGATATGCAAGAGAGGTTATGGTGTGGGGAAAATGGGAATCCTCTTTGAAAAATGACAAGTCTGAGATTACTTCAACCTTTGATGAGGCAACCACCTCATGA 2655 0.4226 MASLLKKLRHGVPSVVDDGGDTEYSVEYSFAEEYKGPPLGYSIPEVPAFKLEQIPVAPIAPSSLNHSSVPVIQPFRKTTNATILSSVPSSNSSRPHALESKNFGDDRKEDIGFHIEVNPIPTNSDTAECSTSLSVSSEIFSCKEEDDDLNDEPISPKHVKRPSAVTFRYPESNGMVDVDEDYVDSECGSGISTPVIYERPQHAVRAGKKGTCYRCLKGNRFTERDVCIVCSAKYCRKCVLRAMGSMPEGRKCVTCIGCGIDEDKRRNLGKSSKMLKHLLTDVEVKKIMHDEMFCEANQIPAEKVCVNGDPLDRDKLMLLLTCANPPKELKPGFYWYDKASGFWGKDGQRPSQVISPELDVGGHLQRDASGGKTKVTINGREITKEELLVLKFAGVQCEGTTDFWVSPDGAYMEVGQKNVKGHIWDKFGAKVASKVLSVPIPSNSVTSTGEGDGVNRDSQDSHQQNMLHKFLLVGSLKSGTSTIFKQAKHLYNIPFSEIERQNIKLVIQRNLCTYLGMLLEGRESFEEESLLEKRNRHHVDESTSSAGNTGEIIETTIYCIGPRLQNFADWLIKYMVSGNLDTIFPDVIDKYGPLVEELWADAAIQATYNRSHELKMLPRSATYFLDRAVEISKTDYEPSDMDIMYAEGINLSNSITSMEFSFPALDAEASLEPGYQHDPSLNAYRYQLIRVHPTSLGENCKWLNMFEDTDVVLFSVALTDYDEYIVDSNGVSTNKMLLAKHLFENIITHRVFSNKKFLLLLTKFDLLEEKIEEIHLTQCEWFNDFNPVISHNHRRCSTSNNNHTNSPPLPHRAFQYIAMKFKSLFHSLTGGGKLFVSLVTGLEPDTVDEALRYAREVMVWGKWESSLKNDKSEITSTFDEATTS* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3089 884 SUPERFAMILY Transducin (alpha subunit), insertion domain 495 646 IPR011025 GO:0007165
Dod03g3089 884 MobiDBLite consensus disorder prediction 85 105 - -
Dod03g3089 884 Pfam G-protein alpha subunit 459 857 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod03g3089 884 SMART galpha_1 452 859 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod03g3089 884 Gene3D - 497 647 IPR011025 GO:0007165
Dod03g3089 884 Gene3D - 650 867 IPR027417 -
Dod03g3089 884 PRINTS Alpha G protein (transducin) signature 709 737 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod03g3089 884 PRINTS Alpha G protein (transducin) signature 757 766 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod03g3089 884 PRINTS Alpha G protein (transducin) signature 469 484 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod03g3089 884 ProSiteProfiles G-alpha domain profile. 466 873 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod03g3089 884 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 17 876 - -
Dod03g3089 884 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 17 876 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod03g3089 884 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 860 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3089 Dod-Chr3 63534823 63540488 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3089 - - ahf:112788912 1167.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3089 03 63534823 63540488 Dod03g3089 03 63534823 63540488 ECH