Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3048 ATGGCGGTGACGGAGGATCTATTCGCGGAATTGAATAACAGCCCCAAAACGTGCGTCGTTTTGGGCGGGAGAGGGTTCCTTGGGAGATCGCTGGTTCTGAGTCTGCTGAAACTCGGGAACTGGATCGTCCGAGTCGCCGATTCGACTCAGTCATTCGAGCTGCACCATTCCGAGTCAACTCTCGCCGAAGCCCTATCCTCCTCTCGCGCCACTTACTTCCATCTCGACCTTCGCGATAAACACAACATCGCCAAAGTTCTTGAAGGTTCTTCGGTTGTGTTTTATATGGATGTTGCTGGCTTAAATGTAAATGACTTCTATAGTTGCTATAAGCTTATAGTGCAAGGTGCAAAGAACGTCATTAGTGCCTGCCGACAATGTAGAGTGAAACGCCTGATTTATAACAGCTCTGCGGATGTAGTATTTGATGGTTTGCATGATATACATAATGGAGATGAATCGTTGGCGTATCCATGGAAAGTTGACAATGTGTTAAGTGACTTTAAGGCTCAGGCAGAAGCGTTGATCCTCAGTGCCAATGACATTGATGGCCTATTGACATGTGCGCTTCGTCCTAGTAATGTTTTTGGACCTGGTGACACAGAGTTCGTACCACATTTTCTAATGTTTGCAAGATATGGTTTCTCAAAGTTTATTATAGGGACTGGTGATAATCTGTCAGACTTCACCTTTTCTGAGAATGTTACTCATGCCCATATCAGTGCAGAAAAAGCCTTAAATTTCCAAACAGTTTCTGTGGCCGGAAAGGCATTTTTTATTACTAACCTTGAGCCTATGAAGTTCTGGAAATTTCTCTCACTTCTGTTGGAAGGCCTTGGATATCAAAGGCCATCCATCAAACTTCCTGTCCATTTGGTGCAATACATTCTCTCTGTTTTCAAGTGGTCACATGAAAAGTTGGGGCCCACAAACTTCAGTTATCCTATATTAGTTCTTTTTTTTCAGTTAGCATCACACACCAGAACTTTCAACTGCATGGCAGCTCGGCAAGAAATTGGATACTCACCAATAGTCTCCCTTGAGGAAGGCATCACGGTAACCATAGAATCATTCTCTCATTTAGCCAGAGACTCATCTTTTACAACATGCTGTGGTTCCACCGAACAGTCAAAAGCAGATCAGCTGCTTGGGGGTGGAAAAGTCGCTGACGTTTTGTTGTGGAGAGATGAGAAAACATCCTTTACGTGTTTCGTTGTGATGGTATTGCTATTTTACTGGTTTTTCCTTTCTGGAAGCACGTTTATAACATCTGCTGCCAGACTTTTGCTGCTTGTCACTTTACTTCTCTCTGGATACAGTATTTTACCATCAAAGCTATTTGGATTCCATATAAATAGGATACCCGTGCCTAGTTTTGAGATATCTGATTCAGAAGTGAAAGGTTCAGTTGCAACTACAGCACATCAGTGGAACAAGGGCTTCAAAACTATAAGAAGACTAGGCCAAGGGGAAGATTGGTCTACATTCTTCAAGGTTGCAGTTCCTCTTTACCTTCTGAAGTTGATCCTGTCAAAACATATGCTGACGACAGTTATAGGGATAGGTCTGATCTTCGCATTTACGGCATTTTATGTTTACGAGCAATATCAATCAGAAGTTCATGCATTAGAGGATATTCTGTTCACCCCACTGAAACAGCTCATGAAATATTTGATTAGCATCTTGCGACTTTCCTCATCACGGCTTCTGTATGGCATTGGCAACTTTCAGCCCTACGATGGACCAAGAAGGGTAAAGGGACAGAGATAG 1770 0.4299 MAVTEDLFAELNNSPKTCVVLGGRGFLGRSLVLSLLKLGNWIVRVADSTQSFELHHSESTLAEALSSSRATYFHLDLRDKHNIAKVLEGSSVVFYMDVAGLNVNDFYSCYKLIVQGAKNVISACRQCRVKRLIYNSSADVVFDGLHDIHNGDESLAYPWKVDNVLSDFKAQAEALILSANDIDGLLTCALRPSNVFGPGDTEFVPHFLMFARYGFSKFIIGTGDNLSDFTFSENVTHAHISAEKALNFQTVSVAGKAFFITNLEPMKFWKFLSLLLEGLGYQRPSIKLPVHLVQYILSVFKWSHEKLGPTNFSYPILVLFFQLASHTRTFNCMAARQEIGYSPIVSLEEGITVTIESFSHLARDSSFTTCCGSTEQSKADQLLGGGKVADVLLWRDEKTSFTCFVVMVLLFYWFFLSGSTFITSAARLLLLVTLLLSGYSILPSKLFGFHINRIPVPSFEISDSEVKGSVATTAHQWNKGFKTIRRLGQGEDWSTFFKVAVPLYLLKLILSKHMLTTVIGIGLIFAFTAFYVYEQYQSEVHALEDILFTPLKQLMKYLISILRLSSSRLLYGIGNFQPYDGPRRVKGQR* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3048 589 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 19 290 IPR002225 GO:0003854|GO:0006694|GO:0016616
Dod03g3048 589 ProSiteProfiles Reticulon domain profile. 388 540 IPR003388 -
Dod03g3048 589 Pfam Reticulon 388 542 IPR003388 -
Dod03g3048 589 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 360 IPR036291 -
Dod03g3048 589 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 14 491 - -
Dod03g3048 589 Gene3D - 8 362 - -
Dod03g3048 589 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3048 Dod-Chr3 63239220 63247681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3048 1 365 Lipid Metabolism Gene Families AT2G33630 28.900 3.87e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3048 K23558 - gmx:100794808 847.04