Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3046 ATGGGTTTGGAATCGGTGGATGATTGGGCGATTCACGTCATTCTGAAGAAGCTCTCTCCCGAAGACGTTGGTAGGGTCGCTTGTGTTAACAAGAGGTTCCGCTCTTCCGCCTCCGAAGATCCTCTTTGGATCAAATTCTGCTCCGATGACCTATTTCTCACTCAGCCCATTGGCCCTCTCGGAACCGCTCTCTCTTCCTTCAAGGAGGCTTATCAATCATGGCGTGAAGCTTTTGGTATGTACCCTTGGCCCCTTGTCAAGCGTGTGAAGAGGTGCTGGGACAGAATAACGACTTGGCTGACTGATAATTTTCCAGAAGCTGGGGCCACTCTTCGCAAAGGCGCATCAGAAGCTGAGATTCAAGAGTTGGAGAGTGCCTTGAAAGTGAAGTTGCCTATTCCCACAAGGATTCTTTATCGCTTTCACAATGGGCAAGATATTCCAAAAGGACATCTAACAACTAGTGGATTTGGCAGTTCTTTGGGCATAATTGGTGGTTACGCATTCTATGAACATTACGTGAATGTGTGTCTATTACCAATAAGTCAGGTCATCCGAAATACTCGACAGTTTACACAGCGATTAGGCATTTTCAGGACATCCGACTCCAAGTATGTTCTTGTGGCTGCTTCGATGACATACAGTGAAAAGTGGTTTTTCCTCAACTGCACCGATGGTCAACTTTATACTGGAACCAAGAATTTTCTTGCTGGTGGAGAAATGGTCCCCTGTGTACCCCATGATCTGATTAGTTTAGGTCATGGGTTGAATAGTGAACAGCAACAGGATTCCATGCTGTTGTGGTTAGAAGAACATGGTCGCCGTTTACAACATGGATTTATCAAACTTCATGAAGAATACAATGTCAGGGCCATTAATCTTTTCCCAGAAGAACCCCCTCTTTGTTCAACGGCTGTAACTAATGGGGTGCAGGTTCGGGCTTCTGCACTGTTTATCCCCGAGATATCTGATCTTCAAGATGATGTTGATAAATATCTATTTGCGTATTCAATCCGCATGTCCCTTGAACGTCAAGGATGCATCATCAATGGAATGTCCTTCAGCTCTTGCCAACTTCATTGGAGGCACTGGATCATTCGTGCCGATGATAATGTAGTAACCGATGTTAATGCAGAAGCTGTTATAGGCCAGTTTCCACTTTTGCGTCCAGGTGATAAGGAATTTGTTTATCAGAGTTGCGCACCTATACCAAAACCATCAGGATCCGTTGAAGGGTCCTTTACATTTGTACCCGGCACATTGGCAGAACCAAAAGGAGCCCCTTTCCTAGTTACAGTGGCAAGCTTCCCACTCCAGCTGCCAGACTATGTATTCTGA 1338 0.4544 MGLESVDDWAIHVILKKLSPEDVGRVACVNKRFRSSASEDPLWIKFCSDDLFLTQPIGPLGTALSSFKEAYQSWREAFGMYPWPLVKRVKRCWDRITTWLTDNFPEAGATLRKGASEAEIQELESALKVKLPIPTRILYRFHNGQDIPKGHLTTSGFGSSLGIIGGYAFYEHYVNVCLLPISQVIRNTRQFTQRLGIFRTSDSKYVLVAASMTYSEKWFFLNCTDGQLYTGTKNFLAGGEMVPCVPHDLISLGHGLNSEQQQDSMLLWLEEHGRRLQHGFIKLHEEYNVRAINLFPEEPPLCSTAVTNGVQVRASALFIPEISDLQDDVDKYLFAYSIRMSLERQGCIINGMSFSSCQLHWRHWIIRADDNVVTDVNAEAVIGQFPLLRPGDKEFVYQSCAPIPKPSGSVEGSFTFVPGTLAEPKGAPFLVTVASFPLQLPDYVF* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3046 445 Gene3D - 7 95 - -
Dod03g3046 445 SUPERFAMILY ApaG-like 306 445 IPR036767 -
Dod03g3046 445 PANTHER F-BOX PROTEIN SKIP16 1 445 - -
Dod03g3046 445 Pfam F-box domain 11 45 IPR001810 GO:0005515
Dod03g3046 445 Pfam ApaG domain 326 417 IPR007474 -
Dod03g3046 445 ProSiteProfiles ApaG domain profile. 304 445 IPR007474 -
Dod03g3046 445 Gene3D ApaG domain 302 444 IPR036767 -
Dod03g3046 445 PANTHER F-BOX PROTEIN SKIP16 1 445 - -
Dod03g3046 445 SUPERFAMILY SMI1/KNR4-like 93 183 IPR037883 -
Dod03g3046 445 SUPERFAMILY F-box domain 11 78 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3046 K10290 - gmx:100809876 658.292