Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3039 ATGGCTTCGAAGAATGAGGTCCCCACAACAGGGAAGGGCCTGGTAGTGTGCTTTGGCGAGATGCTAATAGACTTGGTCCCAACAGTTTCCGGCGTATCATTGGCGGAGGCACCAGGGTTCCTGAAGGCCCCTGGTGGCGCACCCGCCAATGTGGCAATCGCGGTGTCCAGACTAGGGGGCACCGCGGACTTCATAGGGAAGCTGGGACACGACGAGTTCGGGCACATGCTGGCGGGGATCCTGAAGAAGAACGGCCTCAAGGGTGAGGGCATCTCCTTCGACGAGGATGCTCGCACTGCTTTGGCTTTCGTGACGCTACGCCACGATGGGGAACGTGAGTTTGTGTTCGATAGGAACCCTAGCGCTGATATGCTGCTCCAACCACACGAGCTCAATTTGCATCTCATTAGACGGGCTAAAATATTCCACTATGGGTCGATAAGTTTGATAGATGAGCCGTGCAGATCATCGCACCTGAAAGCAATGGAAGTTGCCAAGGAAGCTGGCTGCTTGCTGTCCTATGATCCGAACCTCCGGCTACCACTGTGGCCGTCGGCAGAGGTGGCGCGGGAGCAGATCATGAGTATTTGGGACAGGGCTGATGTGATCAAAGTGAATGAGACTGAGCTTGAGTTCCTAACTGAGAGTGATGGAATTGATGATGTTGATGCTTCAGCTCACTCATTGTGGCACCCAAATTTGAAGCTCCTCCTAGTCACTCTTGGTGAACATGGTTGTAGATACTACACCCAAAATTTTCATGGAGCAGTGGAGACTTTTCATGTGAAAACAGTGGAAACCACTGGCGCTGGCGATTCTTTTGTTGGTGCCCTCTTGTGCAAGATTGTGGATGATCAGTCTATACTTGAAGTGAATCCTAATTAA 885 0.5186 MASKNEVPTTGKGLVVCFGEMLIDLVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGTADFIGKLGHDEFGHMLAGILKKNGLKGEGISFDEDARTALAFVTLRHDGEREFVFDRNPSADMLLQPHELNLHLIRRAKIFHYGSISLIDEPCRSSHLKAMEVAKEAGCLLSYDPNLRLPLWPSAEVAREQIMSIWDRADVIKVNETELEFLTESDGIDDVDASAHSLWHPNLKLLLVTLGEHGCRYYTQNFHGAVETFHVKTVETTGAGDSFVGALLCKIVDDQSILEVNPN* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3039 294 PANTHER HEXOKINASE FAMILY MEMBER 19 290 - -
Dod03g3039 294 CDD bac_FRK 14 279 - -
Dod03g3039 294 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Dod03g3039 294 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Dod03g3039 294 PRINTS Ribokinase signature 237 248 IPR002139 GO:0016301
Dod03g3039 294 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Dod03g3039 294 Pfam pfkB family carbohydrate kinase 14 288 IPR011611 -
Dod03g3039 294 PANTHER BNAA04G18320D PROTEIN 19 290 - -
Dod03g3039 294 Gene3D - 12 292 IPR029056 -
Dod03g3039 294 SUPERFAMILY Ribokinase-like 15 290 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3039 Dod-Chr3 63189145 63191848 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3039 K00847 - gmx:100780082 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1822 10 39723734 39727818 Dod03g3039 03 63189145 63191848 PCT