Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3020 ATGATGATGGCATTGGAATTCAACGTGTTTAGGCTAATTGCACTTTTGAGTGTTATTCTTGTTAGCATTGGTAGTCATAGTGAGGCTGTTGCGCCCATTCTTGACGTTTCTTATCTCAATCGGAGCACTTTCCCCAAAGGCTTCATTTTCGGGACTGCATCCTCCGCCTACCAGTATGAAGGTGCAGCTAGGGAAGGTGGTAGAAGACCCAGTATATGGGATACTTACACCCATAAACACCCAGAGAGAATAAAAGATGGAAGTAATGGAGATGTGGCTGACGATTCGTATCATCGGTATAAGGAAGATATTGGACTCATGAAGAATATGAATATGGATGCTTATAGATTCTCCATTTCTTGGTCTAGAGTATTACCAAAAGGAAAGCTTAGTGGAGGTGTAAACCGCCAAGGAATAGACTACTACAACAACCTAATCAGTGAGCTACGGGCTAATGGTCTGCAACCGTTTGTGACCATTTTTCATTGGGATGTTCCTCAAGCCTTAGAGGAAGAGTATGGTGGTTTTTTAAGCCCGCACATTGTAGATGATTTTAGGGACTATGCTGAACTTTGCTTCGAGGAGTTTGGTGATAGAGTGAAAAATTGGATTACTTTGAATGAACCGAGGAGTGTGAGCAAGAATGGCTATGCAACTGGCAGGTTTGCACCAGGCCGGTGTTCTGCTTGGCTAAAACTGAATTGCACAGGTGGTGATTCAGGGACAGAGCCATATATAACTTCCCATTACCAACTTCTTGCTCATGCTGCTGCTGCCAAGATGTACAAGACCAAATATCAGGCATCTCAAAAGGGTTTAATAGGTATTACCTTAAATTCTGACTGGTTTGTGGCGGTCTCTAAAGAGAAATCAGATCGTGATGCTGCACAGCGAGCCCTGGACTTTATGTTTGGATGGTATATGGAGCCGCTCACAAAAGGTAAGTATCCAAAAAGCATGCGATCTATGGTGGGAAACCGGCTGCCAAATTTCTCTAACGAAGAAGCCAGGCAACTTAAGGGGTCATTTGATTTTCTGGGCTTAAACTACTACTCATCATTTTATGCTGCCTATGCACCTCAACTGCGTGGTCCCAGACCAGCCCAACAAACTGATGCTCTTGTCAATGTTACAAATAATCATGATGGCAAGCCCCTTGGCCCAATGGCTGCTTCGAGCTGGTTATGTATTTATCCAAGAGGATTTCGAGAACTATTGCTCTTCATCAAGAAGAAGTACAGCAACCCTGTAATTTACATTACTGAAAATGGTTATGACGAGTACAACAATCCAACACTAAGACTTGAAGAAGCTCTTATAGATACTTACAGAGTTGATTACTTCTATCGCCATCTTTATTATCTTCACATTGCAATCAGGGATGGTGTGAATGTAAAGGGTTATTTTGCATGGTCATTGTTGGATAACATGGAATGGGACTCCGGCTACACTGTGAGATTTGGACTTGTCTTTGTGGATTTCAAAGATGGCTTGAAACGATACCCAAAACTCTCTGCACAGTGGTTCAAGAATTTCCTCAAGAAACGGTAG 1551 0.4262 MMMALEFNVFRLIALLSVILVSIGSHSEAVAPILDVSYLNRSTFPKGFIFGTASSAYQYEGAAREGGRRPSIWDTYTHKHPERIKDGSNGDVADDSYHRYKEDIGLMKNMNMDAYRFSISWSRVLPKGKLSGGVNRQGIDYYNNLISELRANGLQPFVTIFHWDVPQALEEEYGGFLSPHIVDDFRDYAELCFEEFGDRVKNWITLNEPRSVSKNGYATGRFAPGRCSAWLKLNCTGGDSGTEPYITSHYQLLAHAAAAKMYKTKYQASQKGLIGITLNSDWFVAVSKEKSDRDAAQRALDFMFGWYMEPLTKGKYPKSMRSMVGNRLPNFSNEEARQLKGSFDFLGLNYYSSFYAAYAPQLRGPRPAQQTDALVNVTNNHDGKPLGPMAASSWLCIYPRGFRELLLFIKKKYSNPVIYITENGYDEYNNPTLRLEEALIDTYRVDYFYRHLYYLHIAIRDGVNVKGYFAWSLLDNMEWDSGYTVRFGLVFVDFKDGLKRYPKLSAQWFKNFLKKR* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3020 516 Gene3D Glycosidases 30 515 - -
Dod03g3020 516 PANTHER GLYCOSYL HYDROLASE 34 515 IPR001360 GO:0004553|GO:0005975
Dod03g3020 516 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 34 515 - -
Dod03g3020 516 Pfam Glycosyl hydrolase family 1 41 515 IPR001360 GO:0004553|GO:0005975
Dod03g3020 516 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 48 62 IPR033132 -
Dod03g3020 516 PRINTS Glycosyl hydrolase family 1 signature 441 452 IPR001360 GO:0004553|GO:0005975
Dod03g3020 516 PRINTS Glycosyl hydrolase family 1 signature 486 498 IPR001360 GO:0004553|GO:0005975
Dod03g3020 516 PRINTS Glycosyl hydrolase family 1 signature 342 356 IPR001360 GO:0004553|GO:0005975
Dod03g3020 516 PRINTS Glycosyl hydrolase family 1 signature 462 479 IPR001360 GO:0004553|GO:0005975
Dod03g3020 516 PRINTS Glycosyl hydrolase family 1 signature 418 426 IPR001360 GO:0004553|GO:0005975
Dod03g3020 516 SUPERFAMILY (Trans)glycosidases 31 514 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3020 Dod-Chr3 62597215 62602322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3020 16 516 Glycoside Hydrolase AT5G44640 54.183 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3020 - K01188 gmx:100801874 899.812