Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3018 ATGCTTATGCCACAAATTTATTTATCAAGTTCTTCAACTCCAACCTATCTCATATTTCACAAGCCATGCCTCCGTGGCACTAGTTACCCTTCTTTTCATCAGGTTTGGTCTAGGCCATATTTTCCTAACCAAAGGAATCAGAGAAGGGTTAGGAGTGGCTGCACTGGGGGCAGCAAAATCAAAGCTGTGGCTGTGAGTGAACAAGCTGAGAAGAATTTGGTAAAGGCTAAAGCCACAATCACTGTTCAGTCAACCGTTGGAGGGATCTTCTCAGAAATGTTTATAGAACGAGGGCTTGATGATATAGGGGATTTGCTGGGTAGATCAATTCTTTTGGAGCTTGTTAGCGCTGCGCTTGATCCCAAGACTGCATTGGAGAAGGAAACAATCAAAGGTTACGCCCACAGGAAGGAAGGAACATCAGAAGGAGTCAAGTATGAGGCTGAATTTGAAGTACCATCAAGTTTTGGAGAGATTGGTGGCATTCTTGTGGAGAATGAGCACCACAGGGAGATGTTCATCAAGGATGTTGTTCTCGATGGCTTCCTCATTGGTCCCGTTCACATCTCCTGCAACTCTTGGGTGCATTCCAAGTATGACAACCCTGCTAAGAGGGTCTTTTTCACCACCAAGTCATATTTACCATCGGAGACACCGGAAGGATTGAAGAGGCTAAGAGGAGACGAATTGGAACAATTAAGGGGGAATGGGCAAGGTGAACGCAAGATCGGTGAGCGTATATACGATTATGATGTTTACAACGACCTCGGAGATCCAGACAAGGACATTGAACTCAAGAGGCCCGTTCTTGGTGGCAAGGACCATCCCTATCCCAGGCGTTGCAGAACCGGAAGACCTCGCTGCAAAACAGATCCGTTGTCCGAGCAAAGAAGTAGCAGCATGTATGTGCCCAGGGACGAAAGCTTCTCAGAAGTAAAGCAACTCACATTTTCAACAAAGACAGTATACTCAGGGTTGCATGCTCTGGTACCGTCACTTCAGACGGCAATACTTGACAGGAATCTTGGGTTCCCTTTTTTCTCATCCATAGATGACCTTTTCAATGAAGGGGTTAACTTGCCTCCTTTGGAAAGCAAAGGGATTATCAGGGACATCTTGCCAAGGCTGGTCAAATTTGTTAATGATGTCGAGCAAGACATTCTCCGTTTTGAGACTCCCGCAACAATGGACAAGGACAGGTTCTTTTGGTTTAGGGATGAAGAATTTGCGAGACAAACTCTAGCGGGTCTTAACCCATGTTGCTTAAAATTGGTCACGGAATGGCCATTAAAGAGCAAACTCGACCCCAATATTTATGGCCCAGCGGAATCAGTAATCACCAAAGAAATAGTTGAGCGGGAAATCAGAGGATTCTGTACGGTAGAAGAGGCCGTCAAACAGAAGAAATTGTTCATCCTGGACTACCACGATTTGCTATTGCCAGTAGTAGAGCAAGTTAGACAACTTGAAGGCACAACGTTATATGGATCAAGGACATTGTTCTTCCTAACCCCAGATGACACATTGAGGCCATTGGCCATTGAGCTAACTCGGCCACCCATGGACGGAAAGCCACAGTGGAAGCAAGTCTTCACTCCTGCATGGCATTCAACCGGTGTTTGGCTTTGGAGGCTTGCCAAGGCTCATGTCCTTGCCCACGACTCCGGTTACCACCAACTTGTTAGTCACTGGCTACGAACTCATTGTTGCACAGAGCCTTACATCATCGCAACAAACAGGCAACTGAGTGCAATGCACCCAATCTACAGGCTACTGCACCCACACTTCAGGTACACAATGGAGATCAATGCACTGGCTCGTCAAGCACTGATAAATGCAAACGGAATAATAGAGACCTGCTTCACTCCAGGGAAGTACTCCATCCTATTAAGTTCAATTTCCTATGACAAGGAGTGGCAATTCAACTTGCAAGCCCTCCCTGCTGACCTCATCAACAGGGGAATGGCCGTGGAGGACCCAAATGCCCCTCACGGCTTGAAGCTGACCATAGAGGACTACCCTTATGCCAATGATGGCCTAATTCTTTGGGATGCTATTAAGGGATGGGTCACTGAATACGTGAACCGGTACTATTCAGACTCGAGCCTTGTTGAGTCTGATCAAGAGTTGCAAGCTTGGTGGGAAGAGATCAGAACTGTAGGCCATGCTGATAAGAAAGATGAGCCTTGGTGGCTAGTTCTGAAAACCAAGGAAGATTTGGTTGAAATTGTGACCATTATTACGTGGATAGCTTCAGGGCATCATGCTGCTGTGAACTTTGGCCAATATACTTATGCAGGTTATTTCCCTAACAGGCCCACAATTGCAAGAAACAACATGCCAACGGAGGACCCTTCAGACCCAGAATTGGAACTCTTCTGGGAGAGGCCAGAAGTGACACTGCTCAAGTGCTTCCCGTCCCAAATCCAGGCCACAACCGTGATGGCAGTGTTGGACATATTGTCAGGCCACTCTCCTGATGAAGAGTACATTGGGCAAACCATGGAGCCAGCTTGGGCAAACGACCCTATTGTGAAGGCCGCGTTTGAGAAGTTCAAGGGTAAGTTGATGGAGCTTGAAGGGGTCATTGATGAGAGGAATGCGGATAGGACGAGAAGGAATAGAAACGGTGCTGGGATTGTTCCCTACGAGCTTCTGAAGCCAACTTCGGAGGAAGGTGTGACTGCGAAAGGAGTGCCATATAGTATCTCTATTTGA 2718 0.4698 MLMPQIYLSSSSTPTYLIFHKPCLRGTSYPSFHQVWSRPYFPNQRNQRRVRSGCTGGSKIKAVAVSEQAEKNLVKAKATITVQSTVGGIFSEMFIERGLDDIGDLLGRSILLELVSAALDPKTALEKETIKGYAHRKEGTSEGVKYEAEFEVPSSFGEIGGILVENEHHREMFIKDVVLDGFLIGPVHISCNSWVHSKYDNPAKRVFFTTKSYLPSETPEGLKRLRGDELEQLRGNGQGERKIGERIYDYDVYNDLGDPDKDIELKRPVLGGKDHPYPRRCRTGRPRCKTDPLSEQRSSSMYVPRDESFSEVKQLTFSTKTVYSGLHALVPSLQTAILDRNLGFPFFSSIDDLFNEGVNLPPLESKGIIRDILPRLVKFVNDVEQDILRFETPATMDKDRFFWFRDEEFARQTLAGLNPCCLKLVTEWPLKSKLDPNIYGPAESVITKEIVEREIRGFCTVEEAVKQKKLFILDYHDLLLPVVEQVRQLEGTTLYGSRTLFFLTPDDTLRPLAIELTRPPMDGKPQWKQVFTPAWHSTGVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPIYRLLHPHFRYTMEINALARQALINANGIIETCFTPGKYSILLSSISYDKEWQFNLQALPADLINRGMAVEDPNAPHGLKLTIEDYPYANDGLILWDAIKGWVTEYVNRYYSDSSLVESDQELQAWWEEIRTVGHADKKDEPWWLVLKTKEDLVEIVTIITWIASGHHAAVNFGQYTYAGYFPNRPTIARNNMPTEDPSDPELELFWERPEVTLLKCFPSQIQATTVMAVLDILSGHSPDEEYIGQTMEPAWANDPIVKAAFEKFKGKLMELEGVIDERNADRTRRNRNGAGIVPYELLKPTSEEGVTAKGVPYSISI* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3018 905 PANTHER LIPOXYGENASE 25 903 - -
Dod03g3018 905 ProSitePatterns Lipoxygenases iron-binding region signature 2. 585 595 IPR020834 GO:0016702|GO:0046872
Dod03g3018 905 ProSitePatterns Lipoxygenases iron-binding region signature 1. 558 572 IPR020833 GO:0016702|GO:0046872
Dod03g3018 905 PRINTS Lipoxygenase signature 578 598 IPR013819 GO:0016702|GO:0046872
Dod03g3018 905 PRINTS Lipoxygenase signature 540 557 IPR013819 GO:0016702|GO:0046872
Dod03g3018 905 PRINTS Lipoxygenase signature 558 575 IPR013819 GO:0016702|GO:0046872
Dod03g3018 905 PRINTS Plant lipoxygenase signature 341 362 IPR001246 GO:0016491
Dod03g3018 905 PRINTS Plant lipoxygenase signature 427 446 IPR001246 GO:0016491
Dod03g3018 905 PRINTS Plant lipoxygenase signature 179 197 IPR001246 GO:0016491
Dod03g3018 905 PRINTS Plant lipoxygenase signature 495 519 IPR001246 GO:0016491
Dod03g3018 905 PRINTS Plant lipoxygenase signature 205 226 IPR001246 GO:0016491
Dod03g3018 905 PRINTS Plant lipoxygenase signature 818 832 IPR001246 GO:0016491
Dod03g3018 905 PRINTS Plant lipoxygenase signature 244 260 IPR001246 GO:0016491
Dod03g3018 905 PRINTS Plant lipoxygenase signature 276 295 IPR001246 GO:0016491
Dod03g3018 905 PRINTS Plant lipoxygenase signature 388 404 IPR001246 GO:0016491
Dod03g3018 905 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 212 905 IPR013819 GO:0016702|GO:0046872
Dod03g3018 905 SMART LH2_4 74 210 IPR001024 GO:0005515
Dod03g3018 905 SUPERFAMILY Lipoxigenase 214 905 IPR036226 -
Dod03g3018 905 MobiDBLite consensus disorder prediction 274 302 - -
Dod03g3018 905 ProSiteProfiles PLAT domain profile. 89 209 IPR001024 GO:0005515
Dod03g3018 905 Pfam PLAT/LH2 domain 140 208 IPR001024 GO:0005515
Dod03g3018 905 Gene3D - 232 330 - -
Dod03g3018 905 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 67 213 IPR036392 GO:0005515
Dod03g3018 905 Gene3D PLAT/LH2 domain 70 231 - -
Dod03g3018 905 MobiDBLite consensus disorder prediction 274 292 - -
Dod03g3018 905 Gene3D - 332 419 IPR027433 -
Dod03g3018 905 Gene3D - 555 903 - -
Dod03g3018 905 CDD PLAT_LH2 74 209 IPR042057 -
Dod03g3018 905 Pfam Lipoxygenase 221 888 IPR013819 GO:0016702|GO:0046872
Dod03g3018 905 Gene3D - 420 554 - -
Dod03g3018 905 PANTHER LIPOXYGENASE 25 903 IPR000907 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3018 Dod-Chr3 62554511 62566230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3018 152 905 Acyl Lipid Metabolism Gene Families AT3G45140 62.005 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3018 K00454 - gmx:100787202 1467.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3018 03 62554511 62566230 Dod03g3018 03 62554511 62566230 ECH