Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3012 ATGGATAAATACTTGGTCCCTTTGAAACCCTCAAATGAGAAGCTTCAGCATCTTCGTAGGTGCCGTTGGAAAAGGTGCTCGATTGAACTGAATGGGAGATTCAAGCCCAACTATCGACACGAAAAACTGGATTTGCTAACTCGATCCTATTCCGAGGTTGGAGCTTTTCCGCACGTGTATCATGTGGATGGGGTGCCTTGCCAATCTCATCTTCATCGTGTTGCTAGTGAGGCAAGTGGTGATGGCCGTCCTCTGTGTACAAAGCAAGGCATCTCTGCAATAGACTTTGACAAGCAGGGAATATACTTGGCATCTGTGACAAAACTGGGTTGCTTAACAGTTCATGACTTTGAAGCTCTTTACTGTCAGACTCATGAATTGACTTGCTTGAAAGAGGATGAAAGCAAGCATTTACTGCACCTCTCACTAAAACGACAACTTGATGCTGTCAAATGGAATCCTGTTAATCAGGATGAGGTTGTCTGTGCATCTATAAAAAGTAATGAAGTGCTTATATTTGATGTTGGATATGTATCATCGGAACCAGTTGAGGTGTTAAGCACAAGACATACAGCGACGGTTCATGGTTCCAGCATACACAAAGGTCTCTCTGATGTTGCTTTTACGTCAAATGACTCTAGGATACTTGCTTCTGATACACATGGTGGGATTAATGTTTGGGATAGAAGAGTGAAACGTCTACCTTGTCTCGAGCTTACATCTGGTTCATGTGGTGCCCTTAACAGCATCCAATTAAATGCAGAAAACCAGATTATTTTTGGTGCTGGGAAGCATGGGATTGTGTATGTGTGGGATATTCGCGGCGGAAGAGCATCTGCTGCTTTTCAAAGTCACAAAGAGATATGCCATCCTCCTATGACATCGATGAAGTTGGCAACATTGCTAGAGAAGATTGCATCATTAAAGGCACAAGCTGATATTGTTCCCAAGGAGATTCACTCTATTGATTTTAATCCGTCATGCCCTTATCAGCTTGCATTCCATCTTGACGATGGCTGGTCGGGCATCTTGGATATCAATAATTTGAAAGTTACACATATTCATTGCCCTCCTCCAGCTTGGTTAAATGATTCCTATATTTCCACGGATCTATCATACATCAGAAAACCCTCATGGTTATCTACATGTTCGATCTATTTGACTGGGTCATTATCTGATCGTGGTATTCATCTCTTGGATTTTTATCCTAGCACCAGCTCAGCAAGCCACGTGGATTACGAGGAGGATACACAAGAAATTTCCAAGGGCAAGAACCAAATTAATCGGAACAGATTTATTCCTTTATCTGAAGGAGTTATTTCATGTGCAGCACACCCCTTATATAATGCTATTGTTGCAGGAACCAAGAAAACATCTTTGCTGGTGATTTCTCAAAGACGTGAGTCATGCAGGGGTGATGATTAG 1425 0.4218 MDKYLVPLKPSNEKLQHLRRCRWKRCSIELNGRFKPNYRHEKLDLLTRSYSEVGAFPHVYHVDGVPCQSHLHRVASEASGDGRPLCTKQGISAIDFDKQGIYLASVTKLGCLTVHDFEALYCQTHELTCLKEDESKHLLHLSLKRQLDAVKWNPVNQDEVVCASIKSNEVLIFDVGYVSSEPVEVLSTRHTATVHGSSIHKGLSDVAFTSNDSRILASDTHGGINVWDRRVKRLPCLELTSGSCGALNSIQLNAENQIIFGAGKHGIVYVWDIRGGRASAAFQSHKEICHPPMTSMKLATLLEKIASLKAQADIVPKEIHSIDFNPSCPYQLAFHLDDGWSGILDINNLKVTHIHCPPPAWLNDSYISTDLSYIRKPSWLSTCSIYLTGSLSDRGIHLLDFYPSTSSASHVDYEEDTQEISKGKNQINRNRFIPLSEGVISCAAHPLYNAIVAGTKKTSLLVISQRRESCRGDD* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3012 474 PANTHER WD40 REPEAT PROTEIN 12, 37 1 472 - -
Dod03g3012 474 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 472 - -
Dod03g3012 474 SMART WD40_4 81 116 IPR001680 GO:0005515
Dod03g3012 474 SMART WD40_4 179 228 IPR001680 GO:0005515
Dod03g3012 474 SMART WD40_4 232 272 IPR001680 GO:0005515
Dod03g3012 474 Gene3D - 88 347 IPR015943 GO:0005515
Dod03g3012 474 ProSiteProfiles Trp-Asp (WD) repeats profile. 240 281 IPR001680 GO:0005515
Dod03g3012 474 SUPERFAMILY WD40 repeat-like 88 408 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3012 - - gmx:100780441 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3012 03 62474350 62484534 Dod03g3012 03 62474350 62484534 ECH