Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3007 ATGATGGTGATGAAGCAGCCTTTTATTCTGTTATTGCTGGTGACCCTTTTGGTGTGTTCTTGTGCTGTGGCTAGAGAGTGCACAAACATTCCAACACAGTCTCACACCTTGCAAGGTGAGCTGTTAACATCCAAGAATGCGACATGGAAGCAGGAGGTGATGTCTCGTTACCATTTGACACCAACAGATGACTCAGCTTGGGCAGAGTTGATGCCAAGGAGGTTCCTTTCACAGAGAGACCGGAATGGCTGGGCAGCGATGTACAAGAAAATCAAGAACCCTGCTGTGTTCAACAACTCAGCTGCAGCTGGAGGTGGAGGTGGAGGCGGAGGGTTTCTCAAAGAGGTGCCTTTGCAGGACGTGAGGGTGACCTTTGATTCTAGACATGGGAGGGCACAGCAGACCAACTTGGAGTACCTGTTGATGTTGGATGTGGACAGTTTGATTTGGAGCTTCAGGAAGACTGCTGGCCTTGATGCTCCTGGGAAGCCTTATGGAGGGTGGGAAGGTCCAGATAGTGAGCTCAGGGGTCATTTTGTTGGGCATTTCTTGAGCGCATCAGCTCTAATGTGGGCCAGCACACAGAATGATACCTTGAAGCAAAAAATGTCGGCTGTTGTTGCCGGTCTCTCCGACTGTCAGCAGAAAACTGGAACGGGGTATCTCTCTGCATTTCCTACCGAGTTTTTTGATCGATATGAGGCAATTCAGCCTGTGTGGGCTCCCTATTACACAATTCACAAGATCTTAGCTGGCCTGTTGGATCAACATACTTATGCTGGAAACCCTCAAGCTCTAAAAATGGTGACATGGATGGTTGATTACTTTTACAACCGAGTGATGAATGTAATAACAAAGTACACTATAAATAGACACTATCAAGCTCTGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTATAGATTGTTCACCTTAACGCAAGATCCAAAGCATCTAATGTTGGCTCACCTTTTTGACAAGCCATGCTTTTTGGGGTTGCTTGCAGTACAGGCTAATGACATAGCCGACTTTCATGCTAATACACATATTCCGATTGTTGTTGGAGCTCAAATGCGGTATGAAGTCACAGGCGATCCACTTTATAAGGATATTGGGACATTCTTTATGGACCTCATTAACTCTTCTCACAGCTATGCAACTGGAGGAACATCAGTCAGCGAGTTCTGGCATGATCCAAAGAGAATAGCAGACAACCTAAAATCAACAGAGAATGAAGAATCATGCACAACTTATAATATGTTGAAGGTTTCGCGTCACCTGTTTAGATGGACCAAAGAAGTTTCTTATGCAGATTATTATGAGCGTGCCTTAACTAATGGTGTGCTTAGCATCCAAAGAGGAACTGATCCCGGAGTGATGATTTACATGCTTCCGCTAGGTAGTGGGGTTTCCAAGGCCAAAACTGGACATAGTTGGGGAACACCATTTAACTCTTTCTGGTGCTGCTATGGAACAGGAATCGAATCATTCTCAAAGCTGGGGGATTCTATCTATTTTGAGGAAGAAGGGCAACAACCTACTGTTTACATCATTCAGTACATATCAAGCACATTTAATTGGACATCTGGGAAAGTTGTGCTTAATCAAACAGTTGATCCAGTTGTCTCATGGGATCCCTTCCTACGAGTGACATTTACGTTTTCTCCTAACGAGAAAACTGGGACTCAGTCTACACTGAAATTTCGACTACCATCTTGGACTACTAAGGATGGTGCCAATGCGATATTAAATGACCAAACTTTACCTCTGCCAGATCCAGGAAATTTCTTGTCAGTCACACGACAGTGGAGTGCTGGTGACCAGCTGAAGCTTCAGTTTCCTATTTCCCTCAGAACAGAGGCCGTAAAAGATGACAGGCCTGAATTTGCATCTCTTAAAGCAGTTCTTTATGGACCCTATCTTCTTGCTGGTCACACCACCAACAACACAGACATTAAAGCTGGGGCTAACTCAACTTCTGCAAACTGGATTACTCCAGTTCGTCCCAGCTCTAACCAAGCAGGAACAGTTCAATCCGATCCAATCAGCTTTATCGCTAAAGGGGTAAACGGGGATTTTCTTATGGAACCATTGCTCGCATTCAAAGATGATCCTTACACAGTTTATTTCAACTTTGAAAATTGA 2148 0.4446 MMVMKQPFILLLLVTLLVCSCAVARECTNIPTQSHTLQGELLTSKNATWKQEVMSRYHLTPTDDSAWAELMPRRFLSQRDRNGWAAMYKKIKNPAVFNNSAAAGGGGGGGGFLKEVPLQDVRVTFDSRHGRAQQTNLEYLLMLDVDSLIWSFRKTAGLDAPGKPYGGWEGPDSELRGHFVGHFLSASALMWASTQNDTLKQKMSAVVAGLSDCQQKTGTGYLSAFPTEFFDRYEAIQPVWAPYYTIHKILAGLLDQHTYAGNPQALKMVTWMVDYFYNRVMNVITKYTINRHYQALNEETGGMNDVLYRLFTLTQDPKHLMLAHLFDKPCFLGLLAVQANDIADFHANTHIPIVVGAQMRYEVTGDPLYKDIGTFFMDLINSSHSYATGGTSVSEFWHDPKRIADNLKSTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGSGVSKAKTGHSWGTPFNSFWCCYGTGIESFSKLGDSIYFEEEGQQPTVYIIQYISSTFNWTSGKVVLNQTVDPVVSWDPFLRVTFTFSPNEKTGTQSTLKFRLPSWTTKDGANAILNDQTLPLPDPGNFLSVTRQWSAGDQLKLQFPISLRTEAVKDDRPEFASLKAVLYGPYLLAGHTTNNTDIKAGANSTSANWITPVRPSSNQAGTVQSDPISFIAKGVNGDFLMEPLLAFKDDPYTVYFNFEN* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3007 715 PANTHER PROLINE-TRNA LIGASE (DUF1680) 676 714 - -
Dod03g3007 715 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Dod03g3007 715 SUPERFAMILY Six-hairpin glycosidases 177 482 IPR008928 GO:0005975
Dod03g3007 715 PANTHER - 10 671 - -
Dod03g3007 715 PANTHER - 676 714 - -
Dod03g3007 715 PANTHER PROLINE-TRNA LIGASE (DUF1680) 10 671 - -
Dod03g3007 715 Pfam Beta-L-arabinofuranosidase, GH127 120 644 IPR012878 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3007 Dod-Chr3 62394184 62400744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3007 K09955 - gmx:100781521 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3007 03 62394184 62400744 Dod03g3007 03 62394184 62400744 ECH
Dod03g3007 03 62394184 62400744 Dod10g1785 10 38987673 38996287 PCT