Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2992 ATGCCATCTCTTCACATATTCCACGCTTCCACACCCATCCCTCACTCTAACTCTTACGCTCCCTCCAAAACCCTAATCCCCATTTCCCCATTCTGCTCTTTCTCCCTCTCCCTCCCTCGCCGGACCCTCCCCCGCTCCGCCGCCACCCGCTTCACTTCCGGCACCCTCGACGACCACCAAGAACCGCCTCACGAACTCGACCGCCTCAAATACTCGGACGGCGACATCGATGACGACGAAGACGAAGACGTCGTTGACGTCGACGCGCTCGAGCAAGAAGCCAAGGACGCAGTGGAAGCTTACTCGAGCTCTCTCTCTCGCATCCTGAGCATCGAAGATGAGAAAAATGATATCAAGGAAACAGCTCAAACACGCAAGAGGAGTAAAATTCGAGCAAACAATATCCCGGACAATCTTCTCCCAAGGGTTGCTATTGTTGGGAGGCCAAATGTTGGCAAATCAGCATTATTTAATCGTCTCGTTGGGGGAAACAGGGCAATTGTGGTGGATGAACCTGGGGTGACAAGGGATCGTTTATATGGAAGATCCTATTGGGGAGAGCATGAATTCATGGTAGTCGACACAGGTGGGGTTCTTACTGTTTCAAAATCACAAACTAATGTTATGGAAGATCTAGCTATTACTACTACCATTGGCATGGATGGTATTCCGCTTGCCACTAGAGAGGCCGCAGTTGCCAGGATGCCCTCAATGATTGAGAGACAAGCTATTGCTGCTGTGGAAGAATCATCTGTCATTATTTTTCTGGTTGATGGTCAGGCAGGTCTAACAGCAGCTGATGTGGAGATTGCTGATTGGATTCGTAAAAACTACTCAAATAAATGTGTCATTCTTGCAGTAAATAAGTGTGAATCTCCCCGCAAAGGAATTATGCAGGCATCTGAATTTTGGTCCATTGGGTTTGAACCAATTCCAATATCAGCTATATCAGGGACTGGAACTGGAGATCTTCTTGACCTTGTGTGTTCAGGGCTGCAGAAAGTTGAGGAACCAAACAATCTTGAAGAAGAAAAAGATTATGTTCCTGCAATTTCAATTGTTGGTAGACCAAATGTTGGTAAAAGTAGCATTTTGAATACACTGGTTGGTGAAGACAGAACAATAGTCAGCCCCATCAGTGGCACTACACGTGATGCCATTGATACTGAATTTACCGGAGAAGATGGCCAGAAGTTCCAGCTTATTGATACTGCTGGAATCAGGAAAAGAGCAGCCATAGCCTCAGCCGGAAGTACCACTGAGGCTTTGTCAGTGAACCGAGCATTTCGTGCTATTCGACGTTCTGATGTTGTTGCTCTTGTTATTGAGGCAATGGCTTGTATCACGGAACAGGATTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATAGTTGTGAACAAATGGGATACAATACCGAATAAAAACCAGCAGACTGCAGCATACTATGAGCAAGATGTCAGGGAGAAGCTTCGTATACTTGACTGGGCTCCAATTGTTTATTCTACTGCAGTAGCTGGTCAGAGTGTCAACAAGATTATTGTTGCTGCTAGTGAAGTTGAAAAAGAGAGATCAAGAAGACTCGGTACTTCTATATTGAATCAAGTAGTGCTGGAAGCAGTAGCTTTTAAGCCTCCTCCCAGGACACGAGCTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGGCCACCTACATTTGTATTCTTTGTCAATGATGCAAAACTTTTTCCTGAGACTTACCGCCGCTATATGGAGAAACAACTGCGCACTGATGCTGGTTTTTCTGGTACACCCATTCGGCTTCTGTGGCGCAGCAGAAGGAGAATGGGAAAAGGTGAAGGCAAAGCTTCAACGAAGACCCAAGTGAATCTTTCATCACGGGATTGA 1911 0.46 MPSLHIFHASTPIPHSNSYAPSKTLIPISPFCSFSLSLPRRTLPRSAATRFTSGTLDDHQEPPHELDRLKYSDGDIDDDEDEDVVDVDALEQEAKDAVEAYSSSLSRILSIEDEKNDIKETAQTRKRSKIRANNIPDNLLPRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVLTVSKSQTNVMEDLAITTTIGMDGIPLATREAAVARMPSMIERQAIAAVEESSVIIFLVDGQAGLTAADVEIADWIRKNYSNKCVILAVNKCESPRKGIMQASEFWSIGFEPIPISAISGTGTGDLLDLVCSGLQKVEEPNNLEEEKDYVPAISIVGRPNVGKSSILNTLVGEDRTIVSPISGTTRDAIDTEFTGEDGQKFQLIDTAGIRKRAAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTAAYYEQDVREKLRILDWAPIVYSTAVAGQSVNKIIVAASEVEKERSRRLGTSILNQVVLEAVAFKPPPRTRAGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRTDAGFSGTPIRLLWRSRRRMGKGEGKASTKTQVNLSSRD* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2992 636 MobiDBLite consensus disorder prediction 49 78 - -
Dod03g2992 636 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 141 336 IPR031166 GO:0005525
Dod03g2992 636 Gene3D - 531 615 IPR015946 -
Dod03g2992 636 TIGRFAM small_GTP: small GTP-binding protein domain 349 517 IPR005225 GO:0005525
Dod03g2992 636 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 531 612 IPR032859 -
Dod03g2992 636 Pfam 50S ribosome-binding GTPase 351 472 IPR006073 GO:0005525
Dod03g2992 636 Pfam 50S ribosome-binding GTPase 142 289 IPR006073 GO:0005525
Dod03g2992 636 PANTHER GTP-BINDING PROTEIN 119 622 - -
Dod03g2992 636 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 349 529 IPR031166 GO:0005525
Dod03g2992 636 Hamap GTPase Der [der]. 140 615 IPR016484 GO:0005525
Dod03g2992 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 309 616 IPR027417 -
Dod03g2992 636 MobiDBLite consensus disorder prediction 617 636 - -
Dod03g2992 636 Gene3D - 346 529 IPR027417 -
Dod03g2992 636 Gene3D - 138 345 IPR027417 -
Dod03g2992 636 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 234 611 IPR016484 GO:0005525
Dod03g2992 636 PANTHER GTPASE DER 119 622 - -
Dod03g2992 636 CDD EngA1 144 332 - -
Dod03g2992 636 MobiDBLite consensus disorder prediction 57 73 - -
Dod03g2992 636 PRINTS GTP1/OBG GTP-binding protein family signature 240 258 IPR006073 GO:0005525
Dod03g2992 636 PRINTS GTP1/OBG GTP-binding protein family signature 143 163 IPR006073 GO:0005525
Dod03g2992 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 334 IPR027417 -
Dod03g2992 636 CDD EngA2 351 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2992 Dod-Chr3 62209118 62220023 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2992 - - gmx:100777588 973.385