Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2991 CTCCCCTCCTTCAAAATCTCCTCCTCCTCCTCCTCCTCCTCATCCGCAGTAGAAGCAGTTGCGCCCATCTCGCTTTCTCCGAATAATTCCTCCCACGCCGACCTCGAACCCTACCTCCGCTGTTCCATGCCGCACAAGCGCCTCCGAGTCGCAGTTCTCCTCAGCGGTGGCGTCGACAGCAGCGTCGCCCTCCGCCTTCTCCACGCTGCCGGCCACTCCTGCACCGCTTTCTACCTCAAGATATGGTTCCAAGAAGATTTTGAGAACTTTTGGTCTGAGTGCCCCTGGGAAGAGGATTTGAAGTATGCCAAAGCTGTTTGTAATCAGGTTGAGGTGCCATTAGAAGTTGTGCATTTGACCGATGAATACTGGAACAATGTGGTTTCTTACATCATTGAAGAGTATCGCTGTGGCCGTACTCCTAACCCGGATGTTCTCTGCAATACAAGAATAAAATTTGGTGCGTTCTTGGATGCAATCAGTGGTATGGGTTTTGACTATGTTGCCTCTGGACATTATGCTTATGTTATTCACCCATCTGCGGATCAAATGGATAAGCCTTCTGTTCTAGAGCTATCACAAGACATGGTGAAGGATCAAACTTATTTCCTTTCACACCTCTCACAATCCCAGCTGAAGCAACTTCTTTTTCCTCTTGGTTGTATACCCAAGGATGAAGTTCGCTGGCTTGCCACAACATTTGATCTTCCAAATAAGGATAGAAAGGATTCACAAGGTATATGCTTTTTGGGCAAGATAAGGTTCAGCGAATTTGTTGCAAGACATATTGGGGATAGAGAAGGTATCATATTGGAAGCTGAGACTGGAGATTTCCTTGGCAAACATCGGGGATTCTGGTTTTATACTATTGGCCAGCGCCAAGGTCTAAGGCTACCCGGAGGCCCATGGTATGTTGTTGAAAAGGATGTTAAAAACAACGTAGTTTTTGTGTCAAGAAATTATTATTCCTTTGACAAAAGAAGGCGCTTATTTCGTGTAGGCTCTTTAAAATGGCTGTGTGGGCAGCCCCCAAGCAGGCCAAGTCAGCTTCAGTGCAAGGTGAGACACGGTCCTGGAATCTATAATTGTAGTTTCCAAATGGAAGTTGGAGAAGATGGCCAAGAAGACTTTGCTGTTGTCCGCTTATCTGAAGATGATCAAGGCCTAGCAGCTGGGCAGTTTGCAGCCTTCTACGAGGGAAGAACATGCATAGGTTCTGGTGTGATTTTGGAGTCTTGGGATGATCAGGGTTTTCCTGTTTGTACAAAAGCTTTAGAAATTGCAAGAATGGAAGATAAATCGAAGCTAGGGAATCCAGTTAAGATAAAAGTTAAACCAGATAGCTCGCAAGAGGTGCATGATTTTACAGAGGCAGCAAGCAAA 1383 0.4599 LPSFKISSSSSSSSSAVEAVAPISLSPNNSSHADLEPYLRCSMPHKRLRVAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEEDLKYAKAVCNQVEVPLEVVHLTDEYWNNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFLDAISGMGFDYVASGHYAYVIHPSADQMDKPSVLELSQDMVKDQTYFLSHLSQSQLKQLLFPLGCIPKDEVRWLATTFDLPNKDRKDSQGICFLGKIRFSEFVARHIGDREGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYYSFDKRRRLFRVGSLKWLCGQPPSRPSQLQCKVRHGPGIYNCSFQMEVGEDGQEDFAVVRLSEDDQGLAAGQFAAFYEGRTCIGSGVILESWDDQGFPVCTKALEIARMEDKSKLGNPVKIKVKPDSSQEVHDFTEAASK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2991 461 Pfam tRNA methyl transferase HUP domain 49 252 - -
Dod03g2991 461 CDD tRNA_Me_trans 49 409 IPR004506 GO:0008033|GO:0016740
Dod03g2991 461 Pfam tRNA methyl transferase PRC-barrel domain 257 319 IPR046884 -
Dod03g2991 461 Gene3D - 262 322 IPR023382 GO:0016783
Dod03g2991 461 Hamap tRNA-specific 2-thiouridylase MnmA [mnmA]. 48 410 IPR004506 GO:0008033|GO:0016740
Dod03g2991 461 Pfam Aminomethyltransferase beta-barrel domain 329 409 IPR046885 -
Dod03g2991 461 Gene3D HUPs 37 261 IPR014729 -
Dod03g2991 461 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 49 294 - -
Dod03g2991 461 Gene3D Translation factors 328 417 - -
Dod03g2991 461 TIGRFAM trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 49 409 IPR004506 GO:0008033|GO:0016740
Dod03g2991 461 PANTHER - 7 442 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2991 K21027 - gmx:100785275 771.155