Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2968 ATGGCTCCAACTCTTAGTTCCAATTCATCTCTCTTACCCACAACAACGCCTCATTCAGGGTTGACCCTCAGGAACACAAGGTTGAGAGTCTTTGCCAAGAACTCCGGTCCATTCCCATCACTTAGGCTTGGCAAACCAAAGGATAATGAATCTTCTTCTTCCCCTGAAGAAGGAGGTTCATCTAATTCCAACCCTTTTCGTTTCAACTTTGGGAAGTTGCCTGATGTGACATCCTTGATCCCAGTTGTGAACAGCCCTTCTTCTTCTCCTGGTTTGTCATTTGGAAACACAAGGCGGAAGGACCCTTCAACTGTTTTTGTTGCTGGTGCAACTGGGCAGGCTGGTATTCGCATTGCACAGACACTGCTAAGAGAAGGTTTTAGTGTTAGAGCTGGGGTCCCTGAACTTGGTTCTGCACAAGAATTGGCTCGTCTTGCTGCTCAATACAAGATCATATCAAAGGAAGAGGCAAAGCGCCTCAATGCTGTGCAGTCAAGCTTTGATGATGCAAACGCCATAGCCAAGGCAATAGGCAATGCCAGCAAAGTTGTTGTCACCATTGGTCCAACAGAGAATGGTCCAACCGCGGAGGTATCTATATCAGATGCCTTGCAAGTAGTTCAGGCTGCTCAGCTGGCTGGTGTAGGCCATGTGGCTGTTATCTACGATGAGAACATCGCTGGCAGTGCCTCAACCTACAATGTACTAGATGGCATCTCCTCATTCTTCAGCAATATATTCTCCCGGTCTCAACCATTGACCATACAAGAGTTCTTGCAGAAAGTGATTGAGACAGATGTCAAGTATACCTTCATCAAGACAAGCTTAACTGATGATTTCTTGCCAGAGAGTTCTTATAATGTCGTCGTGTTAGGCGAAGGAAGCTCTGGTGCGAACGACTATAAAGTGGCAAAGTCCAAGATAGCATCCTTAGTGGCTGGTGTCTTCTCCAACACGGAGGTAGCAGAAAACAAGGTTGTGAAAGTGTACACAAGTCCAGAAGCCCCCTTGAGGCGTGTAGATGAACTTTTTAGTACTGTTCCTGAAGACGGAAGAAGGAAAGCCTATGCTGAGCTGCTTGAGAAAGCAAAAGCAGAAGAAGAAGCAAGAGTGGCTGCTGAAAAGGCGCGTGAAGCTGCTGCAGCAGCAAAGAAGCTGGAAGAAGAGGTGAAAAAGCTTTCGCAGCAAGAAGCACGTGCCGCGAGTCTAGCTCAAGAAGCACAAGAGAAAGCAGAGGCTGCTGGAGCTTCAGTGGAAAGCCTCCTGAGCAAGGCCAAAGATTTCGGCGCAGGGCTTTCCTGGCAGAAGTTCAGCTCACAGATTGCTAGCTCAATCCAAAAGCCTGATGATGAGGAACCAAACGTGCAACTAGCCACGGTAAGAGGACAGGCCAAGGCGCGGAGCCTCACGCCTAAGAAAGCAGTGGTTAAACAAACAACTCCAAGAAGTGCTGCTAGCAAACCGAAGGAGGAAAAGCCAAAGCAAGCAGAGAAACCCACTGAGGTGAGGAAGGTATTTGGTGGCCTGTTCAAGCAAGAGACTATCTACGTTGACGATGATTAG 1563 0.4792 MAPTLSSNSSLLPTTTPHSGLTLRNTRLRVFAKNSGPFPSLRLGKPKDNESSSSPEEGGSSNSNPFRFNFGKLPDVTSLIPVVNSPSSSPGLSFGNTRRKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELGSAQELARLAAQYKIISKEEAKRLNAVQSSFDDANAIAKAIGNASKVVVTIGPTENGPTAEVSISDALQVVQAAQLAGVGHVAVIYDENIAGSASTYNVLDGISSFFSNIFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFLPESSYNVVVLGEGSSGANDYKVAKSKIASLVAGVFSNTEVAENKVVKVYTSPEAPLRRVDELFSTVPEDGRRKAYAELLEKAKAEEEARVAAEKAREAAAAAKKLEEEVKKLSQQEARAASLAQEAQEKAEAAGASVESLLSKAKDFGAGLSWQKFSSQIASSIQKPDDEEPNVQLATVRGQAKARSLTPKKAVVKQTTPRSAASKPKEEKPKQAEKPTEVRKVFGGLFKQETIYVDDD* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2968 520 Gene3D - 94 335 - -
Dod03g2968 520 MobiDBLite consensus disorder prediction 1 67 - -
Dod03g2968 520 MobiDBLite consensus disorder prediction 484 501 - -
Dod03g2968 520 MobiDBLite consensus disorder prediction 53 67 - -
Dod03g2968 520 MobiDBLite consensus disorder prediction 444 503 - -
Dod03g2968 520 MobiDBLite consensus disorder prediction 81 100 - -
Dod03g2968 520 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 520 - -
Dod03g2968 520 Pfam NAD(P)H-binding 109 318 IPR016040 -
Dod03g2968 520 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 103 284 IPR036291 -
Dod03g2968 520 Coils Coil 356 424 - -
Dod03g2968 520 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2968 Dod-Chr3 61929898 61932835 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2968 - - gmx:100801140 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2968 03 61929898 61932835 Dod03g2968 03 61929898 61932835 ECH