Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2966 ATGTCGGGCGGTTTCTTTCGTGGCACATCTGCGGATCAGGACACTCGGTTTTCGAACAAGCAATTGAAGCTGCTGAAATCGCAGAAGTTTGCGCCTGAATTGGAGCACTTGGTGGACATGACGAAGGTGAATATGGAGGTGATGAAGCCTTGGATCACCAGAAGGGTGACCGAGCTTCTTGGGTTCGAAGATGAAGTTCTTATTAACTTTATACACAGTCTTCTTGATGCGAAGGAAGTGAATGGGAAGGAAGTCCAGATACAACTTACTGGGTTCATGGAAAAGAACACTGGAAAGTTCATGAAAGAGCTTTGGATGCTTCTTCTCAGTGCGCAGAAAAATGCCAGTGGTGTTCCTCAACAGTTCTTGGATGCCAAGGAAGAAGAACTCCGGACAAAGAAGGTTGAAAATGATAGAATAGCTGGTGAAATTCAGAGGAAAAAAGATAAGGAAGGTCGAGAGGTCATGGAAGAGAAGCTGAAGAAACTGGACGGTGGATTTGATGCGAAGGATAATGATGCTGCTTTGGACCCAACCTTGAAGCCCAGGGATTCAGGGCACTACATTCAGGATGGGAAAGAAACTGACAAGAGGAATGGTGTTAGAGGAAGGAGCAGGGTTTCTAGGTCCCCACATTCACCTGCAGATTCCGTATCGCCTCATCGAGGCTCGCCTTCTAGGTCAATGAGTAAATCATTTTCAAATTCCCGAAGCTATTCTGGTGGTAGACACAGATCAAGGAGCATATCCAGGTCTCCAGGAGCTCGAGGGCGCTCCCGTTCTTCTGGGAGGATTCACCGTTCTCCACGGCGACAATCTATTTCTCCTAGGAGGCATTCACCACGACGGTCTCCCCCTAGGAGGCTATCATATTATAGGCGAAGATCTAGATCTCTTTCAAATGACAGGTCTCCTTCTCCTGTACGACGCAGAATGCATTCTCCATACCGTCGCAGCTCACCTTCTTTTCGTCGACGTAGAACGCCCTCTCCTATTAAAAGGCGGAGCCCGGTGCGTCGGCGTAGATCACCTTCCCCAGTGCGTCGGCATAGATCGCCTACCCCGGTGCGTCGGCGTAGCCCGGTGCGTCGGCTTAGATCGCCTTCTCCAATCCATCGACGTAGATCACCTTCTCCAGTCCGTCGACGTAGATCACCCTCTCCTATAAGACGGCAAAGATCGCCCTCTCCTGTGCTGCGAAGATCCCCTGCCATGCGGCATAGGTCTCCACCTGCCCGTCGAATACCACTTGCCGATTTACGGCGTAGATTGGGTTCTCCCATGCAATCCTCTTCTCCCATACGTAGAAGGTATGGGAGTCAAACTCCACAACGAAGGTCTCCATCTCCTTTGCGACGTAGATCACCTGTTCTTGGTAAGAAAAGATCGCCAAGTCCTTCCCCAAAGAGGTCTCCTTCTCCTGGTGAATGGAGTTCTCAGTCCCCAGTACGGAATGCCCCTCCATCTCCAGTCAGGAGAAATTCTCCAAGACGTCAACGAAGTCCTGTCCAGTCTTCTAGGGGGCGAGTCAGAACACCAGAAAGATTGTCACCTGTGGCTCGTCGATCCTCAAGTCCTCTGCAGTCTGTACAGAGAGATAAGGATCGCAAAGCTCCACGCTATAAATCACAGGACTCAGTTTCCCCATCTGAGAACTCTCCGCTTAGGTCATTGTCTCCGCAAGCAAGGAGTAGGACCAGCAGTGAAGACAGAAGTCCACGGAAGAGCCCTCTGAGGCAAAGAAGAGGCAAGTTGACTAATGAAAGAAGCTTGAGTCCTCCAAAGAAACCAAGAACCCATAAACCTCGCCATGACAGCCCAGAGACAAGTGATGGAGCAGAAGAAACATATTATTCTAGAGAGAGCAGAGATCCTAAATCAAAGTCATTGCAAAAGAAATCAAAATATTCATCTCCGGTTACTAAGCAAAAAGATTCACCTTCAAAGTTTCGTGATGATGAAGATTTCCCTTCTGAGAAGGCAGCTGGTCGCCTGTCTTCTGGATCTCGCCATTATGATGACATTGATGAGAGTAAGAAAGGCCGAGAGATAAAAGGTGATAAATCTTGTGGAAAGGGGGATGAAGCTTCTGTGCGACTGAAGTCACCCATGAATAAAGAAACATTTTCCAGCGGGAAGCCTCATGAATCTCATATTGTAAATACTAAAATTAGTGATGGGCGTCGCAAATCAGAAAAAACTCAAGATTTAGTTGGAAAAGTTGATCGTGTCAATCAGACTGCTTTAGATGATTCTGTTTCTGAGGAAAGTGATAAACGTAGAAAGGAGGGAAAGGATAAGCGAAAGCATAGAAAGTATGAGAAAAAAGCAGTGTCTTCTGATGAAGATTATAGTTCAGATTCTGAGTTGGAGGACAGGAAAGAGGCTAAGAGGAGAAAAAAGGAGGAGAAGAAGCTGCGGAAGGAGGAGAAGCGTCGAAGACGTGAAGAAAGACGATGCCGGAGGGAAGAACGGCGTGCAAAGAAGCTCAAAATGAAGAGTAAAACAGACTATATTTCAGATGATGAGGAAGCTGAACGGATGGATTATCATCGAAGTGATAATGAAGAGACACCGTCTGATCCAAAGAAACTCGAAATTGAGTTGCGGAATAAGGCTCTCGAATCTCTCAAAGCAAAGAGGGGCATCAATAACTAA 2658 0.4733 MSGGFFRGTSADQDTRFSNKQLKLLKSQKFAPELEHLVDMTKVNMEVMKPWITRRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQLTGFMEKNTGKFMKELWMLLLSAQKNASGVPQQFLDAKEEELRTKKVENDRIAGEIQRKKDKEGREVMEEKLKKLDGGFDAKDNDAALDPTLKPRDSGHYIQDGKETDKRNGVRGRSRVSRSPHSPADSVSPHRGSPSRSMSKSFSNSRSYSGGRHRSRSISRSPGARGRSRSSGRIHRSPRRQSISPRRHSPRRSPPRRLSYYRRRSRSLSNDRSPSPVRRRMHSPYRRSSPSFRRRRTPSPIKRRSPVRRRRSPSPVRRHRSPTPVRRRSPVRRLRSPSPIHRRRSPSPVRRRRSPSPIRRQRSPSPVLRRSPAMRHRSPPARRIPLADLRRRLGSPMQSSSPIRRRYGSQTPQRRSPSPLRRRSPVLGKKRSPSPSPKRSPSPGEWSSQSPVRNAPPSPVRRNSPRRQRSPVQSSRGRVRTPERLSPVARRSSSPLQSVQRDKDRKAPRYKSQDSVSPSENSPLRSLSPQARSRTSSEDRSPRKSPLRQRRGKLTNERSLSPPKKPRTHKPRHDSPETSDGAEETYYSRESRDPKSKSLQKKSKYSSPVTKQKDSPSKFRDDEDFPSEKAAGRLSSGSRHYDDIDESKKGREIKGDKSCGKGDEASVRLKSPMNKETFSSGKPHESHIVNTKISDGRRKSEKTQDLVGKVDRVNQTALDDSVSEESDKRRKEGKDKRKHRKYEKKAVSSDEDYSSDSELEDRKEAKRRKKEEKKLRKEEKRRRREERRCRREERRAKKLKMKSKTDYISDDEEAERMDYHRSDNEETPSDPKKLEIELRNKALESLKAKRGINN* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2966 885 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 414 - -
Dod03g2966 885 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 421 882 - -
Dod03g2966 885 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Dod03g2966 885 MobiDBLite consensus disorder prediction 295 309 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 775 803 - -
Dod03g2966 885 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 414 - -
Dod03g2966 885 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 421 882 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 645 701 - -
Dod03g2966 885 Pfam PWI domain 46 115 IPR002483 GO:0006397
Dod03g2966 885 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Dod03g2966 885 MobiDBLite consensus disorder prediction 528 542 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 165 203 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 472 511 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 165 866 - -
Dod03g2966 885 Gene3D PWI domain 33 125 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 719 739 - -
Dod03g2966 885 Coils Coil 791 833 - -
Dod03g2966 885 Coils Coil 123 143 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 425 449 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 260 294 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 567 631 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 703 718 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 543 566 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 210 257 - -
Dod03g2966 885 SMART pwi_2 40 114 IPR002483 GO:0006397
Dod03g2966 885 MobiDBLite consensus disorder prediction 830 866 - -
Dod03g2966 885 MobiDBLite consensus disorder prediction 310 389 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2966 K13171 - gmx:100810238 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2966 03 61921017 61926336 Dod03g2966 03 61921017 61926336 ECH