Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2964 ATGACAATGGCATCATCAACAACTCTTTTCAATTTCAACCTCTCTCCGCCAAAGCCACTTCAACGCCATCGGATAAACAGCTCCAAAGTTCAACTCTCGTCCGTTCGCTTCAATCAGCGCCTTGTATCTTCCATTAACCACCATTTGGTGCCCACGTGCGTCATCAAGTACCCGCTTGTTCCCTCTTGCTACTATGGTCCTAAGCTCAGATTCCACTGTTGTGGGCAGGTTGGAGCACAGAAGGGCTATTCTTCTTCTTCTTCTTCTGCTGGAGAGGAGCCTAAGTCGCTTGTTCCTGACGCAACGTACCAAGAGGAATTCTCTTGGTCTTCTGTGATTTTCCCGTTTCTGTTCCCAGCATTGGGTGGCTTGTTATTTGGTTATGATATTGGAGCCACCTCAGGTGCTACAATCTCACTGCAGTCGCCTGAGCTTAGTGGCATAACTTGGTTCAATCTTTCTGCGGTTCAGCTTGGACTGGTGGTCAGTGGTTCCCTTTATGGGGCTCTTCTTGGCTCACTTCTTGCATTTGCCATTGCTGATTTCCTTGGGAGGAAGCGACAACTCATCGCTGCAGCCCTGTTGTATGTGCTTGGCAGTTCCATCACTGCTTATGCACCAGAACTTGGCGTCCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTTTGGCGATGCATGGGGCTCCTTTATATATTGCAGAAACCTGTCCATCACAAGTCCGTGGGACTCTAGTATCATTAAAAGAACTCTTCATTGTCCTGGGGATTCTGCTGGGTTATTTTGTGGGAAGCTTTCAGATTAATACAGTTGGGGGATGGCGGTTTATGTATGGCTTCAGTGCTCCACTTGCTATTTTAATGGGGCTAGGAATGTGGAGTCTCCCCTCTTCGCCACGGTGGTTGCTTCTCAGAGCAGTTCAAGGGAAGGGTTCATTTCAAGATTTGAAGGAAAATGCAATTGTTTCCCTGAGCAAATTAAGGGGCCGACCACCTGGTGACAAACAATCTGAGAGGCAGATAGAAGAGACCCTTGTCTCATTGAAGTCTGCCTATGCTGATCAGGAATCAGAAGGGAGTTTCTTAGAAGTGTTTCAGGGTCCCAATCTGAAAGCATTCATAATTGGTGGGGGGCTTGTCTTGTTTCAACAGATAACTGGTCAACCAAGTGTTCTGTATTATGCAGGCCCAATTCTTCAGAGTGCTGGATTTTCTGCTGCGTCCGATGCTACCAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTGCTAATGACATGGATTGCTGTCCTAAAAGTTGATGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGCGGCATTGCCCTTTCATTGGTTCTCCTTTCTGCTTATTATAAATTTCTTGGAGGGTTCCCACTGGTCGCTGTTGCGGCTTTACTTCTTTATGTTGGTTGCTACCAGATATCATTTGGGCCAATAAGTTGGCTAATGGTATCAGAAGTCTTCCCACTGCGCACTAGAGGACGAGGGATTAGTCTGGCTGTTCTAACCAACTTTGCTTCAAATGCCGTTGTCACCTTTGCATTCTTGCCATTAAAGGAGCTTCTAGGAGCAGAGAACCTTTTTCTCCTTTTTGGGGCTATTGCTTTAGCGTCACTTCTGTTCATTATATTTTCTGTTCCTGAGACCAAAGGCTTGAGTCTAGAAGATATTGAGTCCAAAATCTTGAAGTGA 1719 0.4607 MTMASSTTLFNFNLSPPKPLQRHRINSSKVQLSSVRFNQRLVSSINHHLVPTCVIKYPLVPSCYYGPKLRFHCCGQVGAQKGYSSSSSSAGEEPKSLVPDATYQEEFSWSSVIFPFLFPALGGLLFGYDIGATSGATISLQSPELSGITWFNLSAVQLGLVVSGSLYGALLGSLLAFAIADFLGRKRQLIAAALLYVLGSSITAYAPELGVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQVRGTLVSLKELFIVLGILLGYFVGSFQINTVGGWRFMYGFSAPLAILMGLGMWSLPSSPRWLLLRAVQGKGSFQDLKENAIVSLSKLRGRPPGDKQSERQIEETLVSLKSAYADQESEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAASDATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGFPLVAVAALLLYVGCYQISFGPISWLMVSEVFPLRTRGRGISLAVLTNFASNAVVTFAFLPLKELLGAENLFLLFGAIALASLLFIIFSVPETKGLSLEDIESKILK* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2964 572 PRINTS Sugar transporter signature 471 492 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2964 572 PRINTS Sugar transporter signature 384 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2964 572 PRINTS Sugar transporter signature 123 133 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2964 572 PRINTS Sugar transporter signature 494 506 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2964 572 PRINTS Sugar transporter signature 213 232 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2964 572 SUPERFAMILY MFS general substrate transporter 116 567 IPR036259 -
Dod03g2964 572 CDD MFS_GLUT10_12_Class3_like 118 566 - -
Dod03g2964 572 Gene3D MFS general substrate transporter like domains 106 570 IPR036259 -
Dod03g2964 572 Pfam Sugar (and other) transporter 118 567 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod03g2964 572 ProSitePatterns Sugar transport proteins signature 2. 218 243 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g2964 572 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 91 572 - -
Dod03g2964 572 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 91 572 - -
Dod03g2964 572 ProSitePatterns Sugar transport proteins signature 1. 176 193 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g2964 572 TIGRFAM SP: MFS transporter, sugar porter (SP) family 112 566 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dod03g2964 572 ProSiteProfiles Major facilitator superfamily (MFS) profile. 115 559 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2964 Dod-Chr3 61896088 61900077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2964 18 572 Organic Solute Cotransporters AT5G59250 72.793 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2964 - - aip:107629076 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2964 03 61896088 61900077 Dod03g2964 03 61896088 61900077 ECH