Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2950 ATGATTTCCCCTATTCCTTCATCATCACCACCGGTGCTTTTTGTGACTTTCCTCTTTGTTACCAACTTTTTCTGCACCTTTCCTGAAAATGTTGTGGCTAATTCAAATCATGGAAGCGTTACGAGGCACTACAAGTTCAATATAAGGCTTACAAATGTTACGAGGCTGTGCCACACAAAAAGAGTAATTACAGTGAATGGGAAGTTCCCGGGGCCACGCGTTGTTGCTAGAGAGGGGGACAGATTATTGGTTACGGTGGTTAATCATGTTCCAAACAATATCACCATCCATTGGCATGGAGTGAGGCAGCTTCGAAGTGGGTGGTCGGATGGGCCATCATACATAACACAATGCCCCATTCAAACTGGCCATAGCTATGTGTACAACTTCACCGTTGTCGGGCAAAGAGGGACTCTCTTCTGGCATGCTCACATCTCATGGTTAAGAGCCACTCTCTATGGACCCTTGATTCTTCTCCCTAGGCGCAATGAATCTTACCCATTTGCCAAACCCTACAAGGAAGTCCCCATCCTCTTTGGTGAGTGGTGGAATGTGGATTCGGAGGCTGTGATTGCACAAGCCCTTCAGACAGGCGCTGGCCCAAATGTCTCTGATGCCTACACCATAAACGGTCTTCCTGGGCCCCTCTACAACTGCTCCAATAACGAGACGTACAAGTTAAAGGTGAAACCTGGGAAGACATATCTCCTGCGTTTGATCAACGCTGCACTCAACGACGAGCTCTTCTTCAAAATAGCAAACCACACCCTCGTGACCGTCGAAGCCGACGCCACCTACGTCAAGCCGTTCGAGTCAGACACAATCGTCATCGGTCCAGGACAAACCACAAACCTCCTCTTACACACAAAACCCAGTTACCCGAACGCCAAATTCTTCATGCTAGCAAGGCCGTACTTCACTGGGATGGGCACATTCGACAATTCAACAGTTGCCGGCATCTTAGAGTACGAGGAGGAACCACCACAAAATAAGCCTAGTACCAGTCAAAACCTCCCGCTATTGAAGCCTACGCTTCCAGCCATCAACGCAACATCAATCGTCGCCAATTTCAGCAACAGATTCCGGAGTTTGAACACCCCAAAGTACCCCGCAAACGTGCCTAAAACCGTTGACAAGAGCTTCTTCTTCACAATAGGGCTCGGAACAAGTCCATGCCCCAGAAACCAAACGTGTCAGGGACCAAACAATAGTTCAAAGTTTGCAGCTGGAATGAACAATTTTTCCTTTGCACTTCCTTCAGTAGCACTTCTCCAGGAGCATTATCTCTTCAGGGAACAAGGTGGTGGGAAACAGGGTGTTTACACGACGGACTTCCCTGTTTCCCCGTTGAGGGAATTCAACTACACGGGGACTCCGCCGAACAACACGAGGGTTGGGAACGGGACGAAGACGGTGGTGATACCGTACAACACGAGGGTTCAGGTGGTGTTGCAGGACACTAGCATTTTGGGAGCTGAGAGCCACCCTTTGCACCTTCATGGGTTCAATTTCTACGTTGTGGGACAGGGGTTTGGGAACTTTAATTATAGTAGGGACCGTACAAAGTTCAACCTTGTTGACCCTGTCGAGAGGAACACTGTTGCTGTCCCCTCTGGTGGCTGGGTTGCTATACGGTTCCTTGCTGACAACCCAGGTGTTTGGCTGATGCACTGCCACTTTGACGTACACCTTAGTTGGGGGCTGAGGATGGCTTGGATTGTTGAGGATGGGAAGCTCCCTAATCAGAAGTTGCCTCCTCCACCGGCTGATCTTCCTAAGTGTTGA 1785 0.4936 MISPIPSSSPPVLFVTFLFVTNFFCTFPENVVANSNHGSVTRHYKFNIRLTNVTRLCHTKRVITVNGKFPGPRVVAREGDRLLVTVVNHVPNNITIHWHGVRQLRSGWSDGPSYITQCPIQTGHSYVYNFTVVGQRGTLFWHAHISWLRATLYGPLILLPRRNESYPFAKPYKEVPILFGEWWNVDSEAVIAQALQTGAGPNVSDAYTINGLPGPLYNCSNNETYKLKVKPGKTYLLRLINAALNDELFFKIANHTLVTVEADATYVKPFESDTIVIGPGQTTNLLLHTKPSYPNAKFFMLARPYFTGMGTFDNSTVAGILEYEEEPPQNKPSTSQNLPLLKPTLPAINATSIVANFSNRFRSLNTPKYPANVPKTVDKSFFFTIGLGTSPCPRNQTCQGPNNSSKFAAGMNNFSFALPSVALLQEHYLFREQGGGKQGVYTTDFPVSPLREFNYTGTPPNNTRVGNGTKTVVIPYNTRVQVVLQDTSILGAESHPLHLHGFNFYVVGQGFGNFNYSRDRTKFNLVDPVERNTVAVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLPPPPADLPKC* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2950 594 CDD CuRO_1_LCC_plant 44 160 IPR034288 GO:0005507
Dod03g2950 594 PANTHER LACCASE 13 594 - -
Dod03g2950 594 SUPERFAMILY Cupredoxins 39 187 IPR008972 -
Dod03g2950 594 CDD CuRO_2_LCC_plant 175 323 IPR034285 -
Dod03g2950 594 SUPERFAMILY Cupredoxins 168 362 IPR008972 -
Dod03g2950 594 Pfam Multicopper oxidase 174 325 IPR001117 -
Dod03g2950 594 Gene3D - 25 159 IPR008972 -
Dod03g2950 594 TIGRFAM laccase: laccase 41 594 IPR017761 GO:0046274|GO:0048046|GO:0052716
Dod03g2950 594 Gene3D - 395 594 IPR008972 -
Dod03g2950 594 SUPERFAMILY Cupredoxins 370 594 IPR008972 -
Dod03g2950 594 Pfam Multicopper oxidase 454 577 IPR011706 GO:0005507|GO:0016491
Dod03g2950 594 ProSitePatterns Multicopper oxidases signature 1. 552 572 IPR033138 -
Dod03g2950 594 PANTHER MULTI-COPPER OXIDASE 13 594 IPR045087 -
Dod03g2950 594 Pfam Multicopper oxidase 49 161 IPR011707 GO:0005507
Dod03g2950 594 CDD CuRO_3_LCC_plant 440 577 IPR034289 GO:0005507
Dod03g2950 594 ProSitePatterns Multicopper oxidases signature 2. 557 568 IPR002355 GO:0005507
Dod03g2950 594 Gene3D - 172 366 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2950 Dod-Chr3 61765810 61772113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2950 K05909 - gmx:100811833 1013.83