Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2929 ATGTCCAACCTGTTGAACGTAGACAACAACAACAGAAGCAAAATGGGCACCCCTTTGTTCCATGAATTCAAGAAGCAAGCTTCTTTCTTCCTCAAGGAGAAATTCAAGAGTGCTAGATTAGCTCTCACTGATGTCACCCCTGCAGAACTGATGACAGAAGAGGCAACAAAGGGAAATCCATGGGCCCCAGATACCCCAACACTCAGATCAATTTCAAGGGCTGCTTTTGAGCTGGATGATTATTGGAGGATTGTGGAGATTCTGCATAAAAGGCTGCTTAAGTTTGAGAAGAAGAATTGGAGGGCATCTTATAATTCTTTGCTTGTGCTTGAGCACCTGTTGACTCAGGGACCAGAAAGTGTTGCAGAGGAATTCCACTGTGACAAAGATGTTATTAGCCAGCTGAAAGGCTTTCAGTATGTTGATGAAACTGGGTTCAACTGGGGCCTAACTGTGAGAAAGAAATCTGAGCGGATAATGAAACTGTTAGAAGAAGCAACTCTTCTCAAGGAAGAGAGAAACCGTGCTAGGAGGTTATCAAGAGGGATTCAAGGTTTTGGTAATTTTAGCCAAAGGTCAACTCCAGCACAAGGAATTCTAAGAGAGAAATCATTGCCAAATACATTTGGCAGATGTAACTCTGAACCCAACAACCAGGAAAATCAGGAAAACCAGTCCTCTTGTTCAAACAATGGAATGGAGGACACAGTAGCTGTCAAATCTAGTAGCCACCAAGGTGGAAATTTCAAGTTAATGGATAGTGTGGAAACCAAGATCTACCAGGATGATCTTGGTAACAGTCAAATGATTCAGAAATCTGAAACAAGTTCTAAAGAAAAAGTGGAGCCTAGCAAGGAGGAATTCCATCTATGGAACCCCAAAGGGGAGTCCAATCCACTTTTGGATAGTAACCAAGAGGATTCCAGACAAGGGATCTTCATAGCAGACGATGATCACCCCTTCAATTCAGCTGCAGAAATGCATGCTACTGCCTCCTTGCTTTGTGCTAGCGATGGAATACTCCAAGGGTGTTGA 1035 0.4309 MSNLLNVDNNNRSKMGTPLFHEFKKQASFFLKEKFKSARLALTDVTPAELMTEEATKGNPWAPDTPTLRSISRAAFELDDYWRIVEILHKRLLKFEKKNWRASYNSLLVLEHLLTQGPESVAEEFHCDKDVISQLKGFQYVDETGFNWGLTVRKKSERIMKLLEEATLLKEERNRARRLSRGIQGFGNFSQRSTPAQGILREKSLPNTFGRCNSEPNNQENQENQSSCSNNGMEDTVAVKSSSHQGGNFKLMDSVETKIYQDDLGNSQMIQKSETSSKEKVEPSKEEFHLWNPKGESNPLLDSNQEDSRQGIFIADDDHPFNSAAEMHATASLLCASDGILQGC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2929 344 MobiDBLite consensus disorder prediction 275 292 - -
Dod03g2929 344 SMART enth_2 46 173 IPR013809 -
Dod03g2929 344 SUPERFAMILY ENTH/VHS domain 26 173 IPR008942 -
Dod03g2929 344 ProSiteProfiles ENTH domain profile. 40 173 IPR013809 -
Dod03g2929 344 MobiDBLite consensus disorder prediction 206 248 - -
Dod03g2929 344 CDD ENTH 48 164 - -
Dod03g2929 344 Coils Coil 152 179 - -
Dod03g2929 344 Pfam ENTH domain 46 167 IPR013809 -
Dod03g2929 344 PANTHER EPSIN-2-LIKE 18 335 - -
Dod03g2929 344 PANTHER EPSIN/ENT-RELATED 18 335 - -
Dod03g2929 344 MobiDBLite consensus disorder prediction 263 304 - -
Dod03g2929 344 Gene3D - 42 189 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2929 Dod-Chr3 61523066 61525045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2929 K12471 - gmx:100811093 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2929 03 61523066 61525045 Dod03g2929 03 61523066 61525045 ECH
Dod10g1720 10 38349482 38351081 Dod03g2929 03 61523066 61525045 PCT