Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2918 ATGGCTCCCTCTTCTTCTTCTTCTTCTTCTTGTTCTCTCACTCACTCACTTCCCATAGCATCACTCCTCATACTCGCCACACTACTCACACCTACCCACTCCCTCTTTCTCACCCTCGTCAACAACTGCAAGTACACCGTCTGGCCCGCCATTCAGCCCAACGCCGGCCACCCCGTCCTCGCCTCCGGCGGTGGCTTCGCCCTCCACCCACTCACCCACCAGTCCATCCCTTTTCCCGACACCCACTGGTCCGGCCGCGTCTGGGCCCGCACCTCCTGCACCCCATCCGGCACCACCTTCACCTGCGCCACCGGCGACTGCGCCGGCCGCCTCCACTGCGATGGCGCCGGCGGCTCCCCCCCCGCTACCCTCGCCCAGTTCGAGGTCCACCACGGCGCCGCCGACTACGCCTCTTACGGCGTCAGCCTCGTCGACGGCTTCAACGTCCCGTTCACCATAACGCCGCACGAGGGCAAAGGTGTTTGCCCCGTCGTAGGTTGTCGCGCCCATCTTGTCGCCACTTGTCCCCCGCCGTTACAGCACCGTTACCCCGCGGGTCACGGGCCCGTAGTCGCGTGTAAGAGCGGATGCGAGGCTTTCCACACCGATGAGTTGTGCTGTCGGAACCATTACAATAGCCCTCAGACTTGTAAGGGGTCCGTGTATTCCATGTTCTTCAAGCACGCGTGCCCTTCGACGTTCACTTTCGCGCATGACACACCTTCCCTCATGCACCAGTGTTCCTCGCCGCGTGAGCTTAAGATTATCTTTTGCCATTAG 780 0.6192 MAPSSSSSSSCSLTHSLPIASLLILATLLTPTHSLFLTLVNNCKYTVWPAIQPNAGHPVLASGGGFALHPLTHQSIPFPDTHWSGRVWARTSCTPSGTTFTCATGDCAGRLHCDGAGGSPPATLAQFEVHHGAADYASYGVSLVDGFNVPFTITPHEGKGVCPVVGCRAHLVATCPPPLQHRYPAGHGPVVACKSGCEAFHTDELCCRNHYNSPQTCKGSVYSMFFKHACPSTFTFAHDTPSLMHQCSSPRELKIIFCH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2918 259 SUPERFAMILY Osmotin, thaumatin-like protein 36 258 IPR037176 -
Dod03g2918 259 PIRSF PR5 1 259 IPR001938 -
Dod03g2918 259 Gene3D Thaumatin 36 258 IPR037176 -
Dod03g2918 259 Pfam Thaumatin family 41 258 IPR001938 -
Dod03g2918 259 PRINTS Pathogenesis-related protein signature 86 97 IPR001938 -
Dod03g2918 259 PRINTS Pathogenesis-related protein signature 36 48 IPR001938 -
Dod03g2918 259 PRINTS Pathogenesis-related protein signature 98 127 IPR001938 -
Dod03g2918 259 PRINTS Pathogenesis-related protein signature 249 258 IPR001938 -
Dod03g2918 259 SMART tha2 37 259 IPR001938 -
Dod03g2918 259 CDD TLP-PA 37 258 - -
Dod03g2918 259 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 24 259 - -
Dod03g2918 259 ProSiteProfiles Thaumatin family profile. 37 259 IPR001938 -
Dod03g2918 259 PANTHER OS03G0233200 PROTEIN 24 259 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2918 Dod-Chr3 61357100 61358413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2918 16 258 Receptor kinase-like Gene Family AT5G38280 35.081 2.41e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2918 - - gmx:100818233 423.705