Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2915 ATGGAAGAGAGGGTGGAAGGTTCTAACTTGAGCATGAGCTCTAAACCAAACAGTGCCATTAGTGGGAAGAAAACGTACCAAAAGCTGCTGGTTGCATCACGCCCTAAAGGTTTTGCACACAGAAATTATGATCACCTTGTTTCATTGACCCACGGTGGATTTGGAAGCAGTGGTTTGGGTCGTCTCACATTCTTTTTACTTAAAGTTGCTGCATTAGAGGCTGTAAGGAGGATATCCAAGAGTAGATGTCCATGTGTGTGGCGAGGGCTGCAGGGTCTACAAATCCTTGTCTGTCCACCATTTAAGTGGATTCAGCGGTGGGCACCTTTCAAGGGTTTGTTCAAAAGCATGCAGGTACTATCGAGACCATTGCTAATCCTTTCGATTGCAACAGTGTTTACTGATCAATCACAATCTAGTGATGGAACGTCAGAGAGTAATATTGATTCCCATGATTCAGAAGTATCTTCCCAACTGTCTCCTGTGCAGGGAAATTCGAATACAAGTCAATGCGAGAGAACTCCTAAAGTTTTAGAATATGAAAACTGGTTGACTCAACTCAAGCAAGAGTTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAATGATGATGAGCTCCACAGATTTTACACAGCTTCTAATAATGACTTTTCAAGCTTTCTTACCTCAGTCAAGAAGACAATACGATGGCGGGAGAGTTACAGAATCTTTTCCGAGGAAGAGCTGGAAATTTGGTCAAATATGGTGTTCTGGCATGGATCTGATGTGAAGCACAGACCTTGCCTCATCGTAAGGCTTGGGTTAGCTTGCAGCTCATTGGCATCTCGAGATAGACCTCAATTTGCTCAGGCAGTCATATCACAGGTCGAATATGGAGTGTTGCACTTGGTCGATGCAGAAAACCCTCAGATTACAGTATTGGTGGACTGTGAAGGGTTATCACCATTGAGAATACCCATGAAAACCATGAGATCTTGTTCTTCCATACTGCAGGATCACTTTCCTAATCGTCTAGGCTGTTTGTTCGTCATACAACTTCCACCAGTTGTTCGCGTTATTGCCCAGACATTTATTCAGGTTTTAAGGCCGACTACTAGGAAAAAGTTGAAAATTGAAGGAGAGATGTATCAGAAAGTTCTTTCCGATAATCTGTCGACACCACCATCATATCTTGGAGGCTGCTGCACTTGCATGAAGTGTTCTAAAATTGGCAAGTGGAATACGCGCCAACCTCGTGCAACTGGTAGCAGCAGGATTGATAGAGAGCTGGATATCAGTGACAATGAGGATTCTCCATCACTGCATCCATCTAATGACCGTCAAAACAGCAATTATTACTATATATTAAGCACTGCTATAATAAGTATCATCGTACTTTGGGTCTTGATAGCTCTAGCTGCTGGATTATACAATCCTGGCAGTCGTGATTTGCCGCCATAA 1443 0.429 MEERVEGSNLSMSSKPNSAISGKKTYQKLLVASRPKGFAHRNYDHLVSLTHGGFGSSGLGRLTFFLLKVAALEAVRRISKSRCPCVWRGLQGLQILVCPPFKWIQRWAPFKGLFKSMQVLSRPLLILSIATVFTDQSQSSDGTSESNIDSHDSEVSSQLSPVQGNSNTSQCERTPKVLEYENWLTQLKQELENQGISLPERINDDELHRFYTASNNDFSSFLTSVKKTIRWRESYRIFSEEELEIWSNMVFWHGSDVKHRPCLIVRLGLACSSLASRDRPQFAQAVISQVEYGVLHLVDAENPQITVLVDCEGLSPLRIPMKTMRSCSSILQDHFPNRLGCLFVIQLPPVVRVIAQTFIQVLRPTTRKKLKIEGEMYQKVLSDNLSTPPSYLGGCCTCMKCSKIGKWNTRQPRATGSSRIDRELDISDNEDSPSLHPSNDRQNSNYYYILSTAIISIIVLWVLIALAAGLYNPGSRDLPP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2915 480 SMART sec14_4 244 397 IPR001251 -
Dod03g2915 480 MobiDBLite consensus disorder prediction 137 172 - -
Dod03g2915 480 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g2915 480 MobiDBLite consensus disorder prediction 410 438 - -
Dod03g2915 480 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 252 400 IPR001251 -
Dod03g2915 480 Pfam CRAL/TRIO domain 248 380 IPR001251 -
Dod03g2915 480 Gene3D - 178 426 IPR036865 -
Dod03g2915 480 SUPERFAMILY CRAL/TRIO domain 245 399 IPR036865 -
Dod03g2915 480 CDD SEC14 240 394 IPR001251 -
Dod03g2915 480 MobiDBLite consensus disorder prediction 416 430 - -
Dod03g2915 480 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 11 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2915 Dod-Chr3 61326040 61330539 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2915 - - gmx:100814843 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2915 03 61326040 61330539 Dod03g2915 03 61326040 61330539 ECH
Dod10g1711 10 38251028 38251658 Dod03g2915 03 61326040 61330539 PCT