Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2878 ATGAAATTAACGGATCTTTTCTGTTCTTCCAATGCTTCCACAGCAGTAACCTCTAGCATGCACCATCGTTCTATGGCACCTAAGAGAAGCAAAAGCTACCACTATGACAGAAGGAAAAGCCAATTACTACCCCATGTCCCTTGTTCATCCCAATTTCCCATCAATCCAAAGCCTTACTTCGAGAAACACAGAAAGAGTACTTCAGCAGAGAAGCACAGAAAGAGTACTTCATCAGAGAAGCACAACAACAGTGACATGCGCAGGCACAGTTCTGTTGAACTCAGCGACCTTTATACTCATCACAGACACAGCACTGATGGTTCATCAAGAAGATATCTCCTTGGTGATGATGCACCCTTTATTGATTGGGTTTCCGAGCCTGATAAAATCCCTTCAATGAATCCTTCTCATCAGCATGATGCTACGGCCAAGCATATGCTCCTTAACAAAGATAGTGATGATTCTCCTGCTCTCATCAGGTCATCGTCTGTGCGTTCCCGGAACCAGGTTGTCGTTTTGAGGGTGTCATTACACTGCAAGGCCTGCGAAGGAAAAGTTAGAAAACATATTTCGAAAATGGAAGGAGTGACATCATTCAGCATAGACATGGAGACAAAGAAAGTGACAATCATCGGAGACGTGACGCCGTTAAGGGCGCTGGCGAGTGTATCCGAGGTGAAGAGCGCGCAGCTGTGGCCATATCCAACATCAACATCAACATCCTCATCCTCATCATCAGTACTTTCATCATCATCATCATCATCTATACCACAATCACCATGGTCGACATGA 792 0.4482 MKLTDLFCSSNASTAVTSSMHHRSMAPKRSKSYHYDRRKSQLLPHVPCSSQFPINPKPYFEKHRKSTSAEKHRKSTSSEKHNNSDMRRHSSVELSDLYTHHRHSTDGSSRRYLLGDDAPFIDWVSEPDKIPSMNPSHQHDATAKHMLLNKDSDDSPALIRSSSVRSRNQVVVLRVSLHCKACEGKVRKHISKMEGVTSFSIDMETKKVTIIGDVTPLRALASVSEVKSAQLWPYPTSTSTSSSSSSVLSSSSSSSIPQSPWST* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2878 263 Gene3D - 166 229 - -
Dod03g2878 263 MobiDBLite consensus disorder prediction 58 89 - -
Dod03g2878 263 Pfam Heavy-metal-associated domain 173 219 IPR006121 GO:0046872
Dod03g2878 263 MobiDBLite consensus disorder prediction 46 89 - -
Dod03g2878 263 CDD HMA 172 229 IPR006121 GO:0046872
Dod03g2878 263 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 245 - -
Dod03g2878 263 PANTHER OS08G0405700 PROTEIN 1 245 IPR044526 -
Dod03g2878 263 ProSiteProfiles Heavy-metal-associated domain profile. 169 229 IPR006121 GO:0046872
Dod03g2878 263 SUPERFAMILY HMA, heavy metal-associated domain 169 225 IPR036163 GO:0046872
Dod03g2878 263 MobiDBLite consensus disorder prediction 233 263 - -
Dod03g2878 263 MobiDBLite consensus disorder prediction 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2878 Dod-Chr3 60962311 60964475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2878 - - gmx:100807544 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2878 03 60962311 60964475 Dod03g2878 03 60962311 60964475 ECH