Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2844 ATGGCCGGCGTCGCGAATAATATCCCATCCCCACCGTCCACTCCCTCAGTCTCCGCCTTCCACCCAAAACGGTGCCGTAGCGCGTGCGTTCGCGCTTCCCTCCCCGGCCAACACAAGGACAACGATCTCACCGGCAAAGCTCGCCCCATCCAATTCCCAATAACCACCGCCGAAGCTCAACCAGACCACGCCAACGCCAACGACCAAAACGACGCCGTTTCCAAAGATCTCCCCTCTCTTCCGCGGCCTTTGACGTCGACTCAGTTATCTGGTTTAGTTTCCGATGGTTCCCGCCTTCGTGTTGCATATCAGGGGGTTCGTGGTGCTTACAGTGAGTCAGCTGCACAGAAGGCCTACCCAAATTGTGAAGCTGTGCCTTGTGAACAATTTGACACTGCTTTTGAATCTGTTGAGAGATGGATTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGCATCCACAGAAATTATGACCTTTTACTCAGGCACAGGTTGCATATAGTAGGAGAAGTGAAATTTGCAGTCCGTCACTGCCTGATGGCCAATCCTGGTGTTAGACTCGGGGATTTGAAGCGGGTTCTTAGTCATCCACAGGCTCTTGCACAATGTGAGAACACACTGACAAAGTGGGGATTGGTTAGAGAAGCAGTCGATGATACAGCTGGCGCTGCAAAGCATATTGCCTTCCACAAAGTACAAGATGCAGGAGCTGTTGCTAGTTCCGCTGCTGCAGAGATATATGGCTTGAATATACTTGCTCAAGACATTCAGGATGATTGCGATAATGTCACCCGATTTCTTATGTTAGCACGGGAACCTATAATTCCGGGCACAGATAAGCCATTTAAGACAAGCATAGCTTTTTCTTTGGAATGGGGTCCTGGGGCACTTTTCAAGGCCCTTGCTGTTTTTGCTCTGCGTCAAATTAACCTAACAAAGATTGAAAGCCGTCCTTTGCGAAAGGATCCTCTTCGAGCATCTGATGACAACAACAATGGGAAGCCCAACTACTTTGATTATCTTTTTTGTGTTGATCTTGAAGCGTCAATGGCTGATCCAAATGCACAAAATGCTTTGAGGCATCTAAAGGAATCCCTTTTTTTCATGGGTTTGCTCCCAGGATTCATTACTTCTGAGTGTGGGTTCGTGGAATTGTGA 1170 0.4838 MAGVANNIPSPPSTPSVSAFHPKRCRSACVRASLPGQHKDNDLTGKARPIQFPITTAEAQPDHANANDQNDAVSKDLPSLPRPLTSTQLSGLVSDGSRLRVAYQGVRGAYSESAAQKAYPNCEAVPCEQFDTAFESVERWIVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVRHCLMANPGVRLGDLKRVLSHPQALAQCENTLTKWGLVREAVDDTAGAAKHIAFHKVQDAGAVASSAAAEIYGLNILAQDIQDDCDNVTRFLMLAREPIIPGTDKPFKTSIAFSLEWGPGALFKALAVFALRQINLTKIESRPLRKDPLRASDDNNNGKPNYFDYLFCVDLEASMADPNAQNALRHLKESLFFMGLLPGFITSECGFVEL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2844 389 Gene3D - 185 263 - -
Dod03g2844 389 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g2844 389 ProSiteProfiles Prephenate dehydratase domain profile. 100 275 IPR001086 GO:0004664|GO:0009094
Dod03g2844 389 Pfam Prephenate dehydratase 101 277 IPR001086 GO:0004664|GO:0009094
Dod03g2844 389 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 73 376 - -
Dod03g2844 389 SUPERFAMILY Periplasmic binding protein-like II 100 281 - -
Dod03g2844 389 SUPERFAMILY ACT-like 270 379 IPR045865 -
Dod03g2844 389 MobiDBLite consensus disorder prediction 58 88 - -
Dod03g2844 389 CDD PBP2_Ct-PDT_like 100 277 - -
Dod03g2844 389 ProSitePatterns Prephenate dehydratase signature 2. 315 322 IPR018528 GO:0004664|GO:0009094
Dod03g2844 389 Gene3D - 282 379 - -
Dod03g2844 389 PANTHER AROGENATE DEHYDRATASE 73 376 - -
Dod03g2844 389 ProSitePatterns Prephenate dehydratase signature 1. 251 273 IPR018528 GO:0004664|GO:0009094
Dod03g2844 389 ProSiteProfiles ACT domain profile. 289 382 IPR002912 -
Dod03g2844 389 MobiDBLite consensus disorder prediction 57 88 - -
Dod03g2844 389 Gene3D - 98 184 - -
Dod03g2844 389 CDD ACT_CM-PDT 287 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2844 Dod-Chr3 60332192 60336475 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2844 K05359 - fve:101304171 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2844 03 60332192 60336475 Dod03g2844 03 60332192 60336475 ECH