Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2822 ATGCACAGGATCAACAGGGCAAGTTCCATTTGTTCTGCAATTTTCAGAAGGAAAACTCAGTCTCACTGTGCGGCTTCTTTCTCTACCTCCTTGCTCTTCGACGATACCCAGATTCAGTTCAAAGAAAGTGTTGCTCAGTTTGCAGCTGAAAACATTGCCCCTCATGCTCCAAAAATAGATCACACAAATTATTTCCCTCAGGAGGTTAACTTATGGAAAAGTATGGGAGAATTTAATCTTCATGGGATTACTGCACCAGAGGAGTATGGAGGGCTTGGTCTGGGGTACCTGTATCACTGTATAGCAATGGAAGAGATAAGCCGTGCTTCTGGCTCAGTTGGTCTTTCATATGGTGCTCATTCAAACCTGTGTATAAATCAGCTGGTGAGGAATGGAAGCCCAGCTCAGAAACAGAAATACTTGCCAAAGCTTATCTCTGGGGATCATGTAGGAGCTTTGGCAATGAGTGAGCCCAATTCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGGTTATGTACTTAATGGGAACAAGATGTGGTGTACTAATGGTCCAGTTGCTCAAACGTTGGTTGTCTATGCAAAAACAGACATAACAGCTGGATCAAAAGGAATCACTGCATTTATCATCGAAAAGGGAATGCCAGGATTCAGCACTGCCCAAAAATTGGATAAACTTGGGATGCGAGGAAGTGATACATGTGAGCTTGTCTTCGAGAATTGCTTTGTCCCTGAAGAAAATGTTCTTGGGCAATTAGGGAAAGGGGTCTATGTCATGATGTCTGGGCTGGATCTGGAGAGACTTGTTTTGGCAGCTGGTCCCCTAGGTATCATGCAGGCATGTCTTGATGTTGTCCTTCCTTACGTTCGACAAAGAGAGCAGTTTGGTCGTCCTATTGGGGAATTTCAATTTATACAGGGGAAACTTGCTGACATGTATACTTCTTTACAGTCCTCAAGGGCATATGTGTATTCCGTAGCTCGGGATTGTGACAACGGAAAAATTGACCCAAAGGATTGCGCCGGAGTTATCCTTTGTGCAGCTGAAAGAGCAACCCAGGTTGCGTTGCAGGCGATACAATGTTTAGGTGGGAATGGCTATGTGAATGAGTATCCAACTGGTCGTCTCCTGAGAGATGCCAAACTGTATGAGATTGGTGCAGGGACTAGTGAGATCAGAAGAATGATTATTGGACGTGATCTCTTCAAGGAGCAATGA 1236 0.4458 MHRINRASSICSAIFRRKTQSHCAASFSTSLLFDDTQIQFKESVAQFAAENIAPHAPKIDHTNYFPQEVNLWKSMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNGSPAQKQKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADRVDGGYVLNGNKMWCTNGPVAQTLVVYAKTDITAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQLGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPIGEFQFIQGKLADMYTSLQSSRAYVYSVARDCDNGKIDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMIIGRDLFKEQ* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2822 411 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 28 270 IPR009100 GO:0016627
Dod03g2822 411 CDD IVD 33 409 IPR034183 GO:0003995
Dod03g2822 411 Gene3D - 151 263 IPR046373 GO:0016627
Dod03g2822 411 Pfam Acyl-CoA dehydrogenase, C-terminal domain 259 407 IPR009075 GO:0016627
Dod03g2822 411 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 366 385 IPR006089 GO:0003995
Dod03g2822 411 Pfam Acyl-CoA dehydrogenase, N-terminal domain 35 148 IPR013786 GO:0016627|GO:0050660
Dod03g2822 411 PANTHER 2-METHYLACYL-COA DEHYDROGENASE, MITOCHONDRIAL 1 411 - -
Dod03g2822 411 PANTHER ACYL-COA DEHYDROGENASE 1 411 - -
Dod03g2822 411 ProSitePatterns Acyl-CoA dehydrogenases signature 1. 154 166 IPR006089 GO:0003995
Dod03g2822 411 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 258 409 IPR036250 GO:0016627
Dod03g2822 411 PIRSF PIGM 28 137 - -
Dod03g2822 411 PIRSF PIGM 158 411 - -
Dod03g2822 411 Pfam Acyl-CoA dehydrogenase, middle domain 152 247 IPR006091 GO:0016627
Dod03g2822 411 Gene3D - 24 149 IPR037069 GO:0016627|GO:0050660
Dod03g2822 411 Gene3D - 264 408 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2822 1 411 Acyl Lipid Metabolism Gene Families AT3G45300 83.942 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2822 K00253 - gmx:100784046 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2822 03 60099316 60104977 Dod03g2822 03 60099316 60104977 ECH