Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2809 ATGACAAAGAAATTGCGTTCTGCTTCTTCGTTGCAAGAGGATGAAGAGAAGGTGAGTGGCTTTTTGAAAATGGATTTAAGGGAAGGAGTGAATGATGGTCTTTCTAGAAATGGACCAAGTGATTTGCTTCTCCCAGGTCTCATCGATGATGTTGCGATGAATTGCCTTGCTTGGGTTAGTAGATCTGATTATGCTTCACTATCATGTATAAATAAGAGGTATAACTTGCTTATTAAAAGTGGCTATCTATCTGAGTTGAGGAAGAAGTTAGGGATTGTGGAGCTGGAGCATTTGGTTTATTTGGTTTGTGACCCGCGAGGATGGGAGGCATTTGACCCTAAGAGAAATAGATGGATAACTTTACCTAAGATACCCTGTGACGAGTGTTTTAACCATGCCGACAAGGAGTCCTTGGCTGTAGGCAGTGAGCTGTTGGTTTTTGGCCGTGAATTGATGGATTTTGCCATTTGGAAGTATAGCTTGGTTTCTCGCAGTTGGGTGAAGTGTCAGGGGATGAGCCGACCTCGCTGTTTGTTTGCGTCTGGCAGTCATGGTTCAATTGCTATTGTTGCTGGTGGAAGTGATAAGTTTGGAAATGTTCTTGATTCAGCCGAGGTGTATGACTCTTCATCAGGTACATGGGAACTGTTACCAAACATGCAAACACCACGTAGGTTGTGCTCTGGTTTTTTTATGGATGGCAAGTTCTACGTGATTGGTGGAATGTCAAGTCCTACTGTTTCATTGACTTGTGGGGAGGAGTACAATCTTAAGACAAGAAACTGGCGGAAAATAGAGGGCATGTATCCATATGTTAATCTGGCCGCTCAAGCACCTCCACTTGTGGCAGTTGTGGATAATCAGTTGTATGCAGTTGAGCATCTAAGCAACATGGTGAAGAAATATGACAAGGAAAAGAACACCTGGAGCGAATTGGGAAGGCTTCCAGTTCGGGCTGATTCTTCTAATGGATGGGGTCTGGCTTTCAAGGCTTGTGGAGAAAAGCTTCTGGTTGTGGGTGGACAAAGAGGTCCAGAAGGTGAAGCAGTTGTACTGAATTCATGGAGTCCTGGAACAGGTGTCAGGAATGGAACCATAGATTGGCAGGTACTTGGCGTGAAGGAGAATGTTGGTGTGTTTGTGTACAATTGTGCTGTTATGGGTTGGTCTGGGGAGATGCGTTTAGATTGA 1191 0.4433 MTKKLRSASSLQEDEEKVSGFLKMDLREGVNDGLSRNGPSDLLLPGLIDDVAMNCLAWVSRSDYASLSCINKRYNLLIKSGYLSELRKKLGIVELEHLVYLVCDPRGWEAFDPKRNRWITLPKIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLVSRSWVKCQGMSRPRCLFASGSHGSIAIVAGGSDKFGNVLDSAEVYDSSSGTWELLPNMQTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYNLKTRNWRKIEGMYPYVNLAAQAPPLVAVVDNQLYAVEHLSNMVKKYDKEKNTWSELGRLPVRADSSNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWSPGTGVRNGTIDWQVLGVKENVGVFVYNCAVMGWSGEMRLD* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2809 396 SMART kelc_smart 235 279 IPR006652 GO:0005515
Dod03g2809 396 SMART kelc_smart 187 234 IPR006652 GO:0005515
Dod03g2809 396 Gene3D - 98 377 IPR015915 GO:0005515
Dod03g2809 396 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 39 388 - -
Dod03g2809 396 Pfam Kelch motif 175 221 IPR006652 GO:0005515
Dod03g2809 396 Pfam Kelch motif 223 268 IPR006652 GO:0005515
Dod03g2809 396 SUPERFAMILY Kelch motif 107 344 IPR015915 GO:0005515
Dod03g2809 396 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 39 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2809 Dod-Chr3 59925100 59926775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2809 42 266 Miscellaneous Gene Families AT4G33900 26.667 1.35e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2809 - - gmx:100792139 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2809 03 59925100 59926775 Dod03g2809 03 59925100 59926775 ECH