Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2808 ATGCCAGATGAAATCCTTGCCAACATCGTATCTCGTTTGACCATCAAAGAAGCTGGTAGCACTAGTGTCCTGTCAACTAAGTGGAGATACCTCTGGACCCTTTTCTTTGGTCTCTTGAACTTCGACCATTCAGTTAAGCTCTTCAACCTGCGCCGACGAAGAATGCCACTTTTGAGGAAATGCAACCGCTTTGTCTCTGAGTGGGAGAGGTTCATGTCCAACGTGGAACACGTGCTGAAATCACTCAAGAGCCCTTCTTTGCATGGTCTCAAGGTTAGCTTCGACATGGGGAATCCAAAGAAGGTAGCTGAACTGTTCGTGTTTGCTGCTGAGAAAGATGTTCAAGTTCTTGAGCTTGATTTCTCGTTTCACTTCCACATGGTCTTCTTCACCATAAGTGAGACCATTCGCAATGTTTTGTCTAATGGTTTCAAGATGAAGTCACTCAAGGAATTGCGTTTGGTTTGTGTGGAAGTGAAGGGTAAGATCCTTGAGCAGTTCCTAGCACTTTGTCCATCTCTTGAAACGCTGTATGTGAGGGATTCGAGGCGTCTTTCGAGACTTAGAGTTTGCGGCGAAGGGTTGAGGTTGAAACATCTGGCATTGGTCGAATGCAACCTTGGGTATCTCTACATTTCTGCTGTCAATCTTGTGGCATTCACGTACAAAGGAGAGTATGGAGATTTTGTCTTTGACAGTGTCCCAAACCTGGTGGAAGCCACCTTTGGTAAACGGTATGCTAGTTACGTGCAATTACACATGACGGATGATATTGATGTTCATCGATTGCTCTCGCAGCTGAATGTTCTGAAATTGGAGCTGTTTCCTTTCGATCTGACATTTCTTGTAGGACTGCCTGTGTACAATAATGTGGATCATCTGGAGCTGGCGATTCCCCAAGAATATGGAAAGGAGCTCGATCGCCCTGTTTCTTTACTAAGCGCATTTCCTTCTATAAGTGTGCTCACGCTGAAGTTCCTTTGGTACAGGATCATGCCACCATCCGAGGAGCCATGGATAGCCACTCCAGAAGTTGTGCTCCCTAACCTGGAGGTGTTGGAGGTGTCAGGGTGCAGAAGAGACACTAGTCAAAATGAGTTCATCAGGAGCATAATTGAGAATGCCCCTAATCTCACAAAGATTGTTGTGGATCCAGTCTCATCAATTCATGAGAGCAGGTCAGATGAATTCAAGGCCATGATTAAAGCACTGCACCGTGACTTTAGCTTATGGTTTGCTGATAGCCTCAAACCAGATGTGCCTCAACATGTTGAATTGGTTGTCCTAACTTTGGTGCTTCCATTTGTCTTCTCGGTGGGATTTGATGAGACACCCTTGAATCATGAAGTTGAATTTGGTTTGAACAATTTGCCTCCATTGTATTCCTCTTCTTCTGCAGGTGATGATGATATTTTATGCCTACATTTCTGCCATGTGGGGCTAGCAGGACACGAACTGAAAATGAGTATTTGGCGCATGCCATCATAG 1488 0.4503 MPDEILANIVSRLTIKEAGSTSVLSTKWRYLWTLFFGLLNFDHSVKLFNLRRRRMPLLRKCNRFVSEWERFMSNVEHVLKSLKSPSLHGLKVSFDMGNPKKVAELFVFAAEKDVQVLELDFSFHFHMVFFTISETIRNVLSNGFKMKSLKELRLVCVEVKGKILEQFLALCPSLETLYVRDSRRLSRLRVCGEGLRLKHLALVECNLGYLYISAVNLVAFTYKGEYGDFVFDSVPNLVEATFGKRYASYVQLHMTDDIDVHRLLSQLNVLKLELFPFDLTFLVGLPVYNNVDHLELAIPQEYGKELDRPVSLLSAFPSISVLTLKFLWYRIMPPSEEPWIATPEVVLPNLEVLEVSGCRRDTSQNEFIRSIIENAPNLTKIVVDPVSSIHESRSDEFKAMIKALHRDFSLWFADSLKPDVPQHVELVVLTLVLPFVFSVGFDETPLNHEVEFGLNNLPPLYSSSSAGDDDILCLHFCHVGLAGHELKMSIWRMPS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2808 495 Pfam F-box domain 1 32 IPR001810 GO:0005515
Dod03g2808 495 PANTHER LIGASE, PUTATIVE-RELATED 1 429 - -
Dod03g2808 495 SUPERFAMILY RNI-like 71 410 - -
Dod03g2808 495 PANTHER F-BOX PROTEIN-LIKE 1 429 - -
Dod03g2808 495 SUPERFAMILY F-box domain 1 34 IPR036047 GO:0005515
Dod03g2808 495 Gene3D Ribonuclease Inhibitor 45 406 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2808 Dod-Chr3 59919359 59921912 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2808 1 79 EF-hand Containing Proteins AT5G41840 40.506 5.19e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2808 - - gmx:100778140 418.698